FastQCFastQC Report
Sat 15 Feb 2025
H2MGNDMX2_n01_O_F_b_24.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH2MGNDMX2_n01_O_F_b_24.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences103890963
Sequences flagged as poor quality0
Sequence length101
%GC37

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TATATATACAGGCAACACGCAGATATAGGTGCGACGTGAACAGTGAGCTG1977520.19034571852029133No Hit
GTATATATATATACATGAGAAGAACGGCATAGTGCGTGTTTATGCTTAAA1212110.11667136053017432No Hit
GAGATATATAGCAAAGAGATACTTTTGAGCAATGTTTCAGGGCACAGTAT1060590.10208683887163507No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)