FastQCFastQC Report
Thu 18 Jan 2024
H2L2LDSXC_l04_n01_A_QG3503.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH2L2LDSXC_l04_n01_A_QG3503.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16061255
Sequences flagged as poor quality0
Sequence length151
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTAGGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGGCT360090.22419792226697105No Hit
GGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGG321880.20040775144906173No Hit
CCTAAGCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGCC269190.1676020958511648No Hit
GCTTAGGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGGCTTAGGC268230.16700438415304408No Hit
GCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGC267610.16661836201467445No Hit
CTAAGCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGCCTAAGCCT247740.15424697509627983No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)