H2KT5AFXY_n01_ah9722a-0518.fastq.gz FastQC Report

Summary

Basic Statistics
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Adapter Content
Kmer Content

Basic Statistics

Measure	Value
Filename	H2KT5AFXY_n01_ah9722a-0518.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	8505354
Sequences flagged as poor quality	0
Sequence length	101
%GC	39

Per base sequence quality

Per base quality graph

Per tile sequence quality

Per base quality graph

Per sequence quality scores

Per Sequence quality graph

Per base sequence content

Per base sequence content

Per sequence GC content

Per sequence GC content graph

Per base N content

N content graph

Sequence Length Distribution

Sequence Duplication Levels

Duplication level graph

Overrepresented sequences

No overrepresented sequences

Adapter Content

Adapter graph

Kmer Content

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGCCGTC	3195	0.0	7.73028	48-49
AGGGGGG	2150	0.0	7.6222467	72-73
GCCGTCT	2910	0.0	6.773574	48-49
CGTATGC	3575	0.0	6.576456	44-45
TATGCCG	3870	0.0	6.443341	46-47
CATCTCG	3090	0.0	6.3789964	38-39
GTATGCC	3255	0.0	6.2745156	44-45
ACTTAGG	4055	0.0	6.149378	32-33
GCATCTC	3950	0.0	5.771742	38-39
AGGCATC	4680	0.0	5.6326127	36-37
CTCGTAT	4235	0.0	5.495477	42-43
GCACACG	9735	0.0	5.490664	94-95
AAGGGGG	2975	0.0	5.42868	72-73
CTTAGGC	3820	0.0	5.408647	32-33
TTAGGCA	4660	0.0	5.401977	34-35
ATGCCGT	3975	0.0	5.2574883	46-47
CCGTCTT	4635	0.0	5.174929	50-51
AGATCGG	18580	0.0	5.114375	94-95
ATCTCGT	4450	0.0	5.016497	40-41