H2KH2AFXY_n01_p2h2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H2KH2AFXY_n01_p2h2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	33930
Sequences flagged as poor quality	0
Sequence length	151
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCTGATCGTCTTCGAGCCCCCAACTTTCGTTCTTGATTAATGAAAAC	67	0.197465369879163	No Hit
ACCATACTCCCCCCGGAACCCAAAAACTTTGATTTCTCATAAGGTGCCAG	59	0.1738874152667256	No Hit
TCATTACTCCGATCCCGAAGGCCAACACAATAGGATCGAAATCCTATGAT	51	0.15030946065428824	No Hit
GGATAACATCATAGGATTTCGATCCTATTGTGTTGGCCTTCGGGATCGGA	49	0.1444149720011789	No Hit
ATGTTATCCCATGCTAATGTATCCAGAGCGTAGGCTTGCTTTGAGCACTC	46	0.13557323902151489	No Hit
CCTATAAGCAACATCCGCTGATCCCTGGTCGGCATCGTTTATGGTTGAGA	41	0.12083701738874152	No Hit
ATCTAAATCCCTTAACGAGGATCCATTGGAGGGCAAGTCTGGTGCCAGCA	38	0.11199528440907752	No Hit
GGTATAGGTCGCGCGCTTAAGCGCCATCCATTTTCGGGGCTAGTTGATTC	35	0.10315355142941349	No Hit
GTCTACGAGTCGGGTTGTTTGGGAATGCAGCCCCAATCGGGCGGTAAATT	35	0.10315355142941349	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CAGGCCT	10	0.0070671183	144.95723	9
GACTGGC	10	0.0070671183	144.95723	7
CCCCCCG	20	3.8380685E-4	108.71792	9
TCCCCCC	20	3.8380685E-4	108.71792	8
ACCATAC	25	9.264464E-4	87.102806	1
ACTCCCC	30	0.0019105967	72.58567	6
ATACTCC	35	0.0035203071	62.21629	4
CCATACT	35	0.0035203071	62.21629	2
CTCCCCC	35	0.0035409979	62.124527	7
AAGACTG	40	0.0059727323	54.439255	5
CCAAGAG	40	0.0059727323	54.439255	3
ACTTGCC	40	0.0060077882	54.35896	8
ATTCCTC	40	0.0060077882	54.35896	8
CTTCCGA	55	3.156248E-4	52.789577	1
CCGATCT	60	4.8489054E-4	48.390446	4
TCTTCCG	45	0.009514995	48.390446	5
TTCCGAT	60	4.8489054E-4	48.390446	2
CATACTC	45	0.009514995	48.390446	3
ACCACCC	45	0.009570763	48.319073	8
GTGCTCT	70	0.0010361881	41.477528	1