H2KH2AFXY_n01_p2g6.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H2KH2AFXY_n01_p2g6.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	391450
Sequences flagged as poor quality	0
Sequence length	151
%GC	53

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTGTTAAGAAGAGGAATTGAACCTCTGACTGTAAAGTTTTAAGTTTTATG	779	0.19900370417677862	No Hit
CCCTAACGTTGCCGTCAACCGCCACGTCCCGGTTCCGGAATTTTAACCGG	751	0.1918508110869843	No Hit
GTATCTGATCGTCTTCGAGCCCCCAACTTTCGTTCTTGATTAATGAAAAC	537	0.13718227104355601	No Hit
GAGTAGGAGGGCGCGGCGGTCGCTGCAAAACCTAGGGCGCGAGCCCGGGC	479	0.122365563928982	No Hit
GTGCAGATCTTGGTGGTAGTAGCAAATATTCAAATGAGAACTTTGAAGGC	449	0.11470174990420232	No Hit
CTTATACACATCTCCGAGCCCACGAGACTAGGCATGATCTCGTATGCCGT	417	0.10652701494443734	No Hit
GGTATAGGTCGCGCGCTTAAGCGCCATCCATTTTCGGGGCTAGTTGATTC	417	0.10652701494443734	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TTCCGAT	3090	0.0	60.304874	2
CTTCCGA	3120	0.0	59.96508	1
CCGATCT	3120	0.0	59.020306	4
TCATACA	50	2.0090854E-4	57.997902	4
CGATCTA	530	0.0	56.082882	5
TCCGATC	3505	0.0	53.15785	3
CGATCTG	1670	0.0	48.621	5
CGATCTC	1135	0.0	45.98953	5
TATCGTG	120	1.9698928E-7	42.29014	5
ATCTGAG	140	1.411172E-8	41.427074	7
GATCTAA	160	1.0077201E-9	40.779778	6
GATCTGG	625	0.0	40.598534	6
GATCTCT	305	0.0	40.408375	6
TATAGAA	95	1.0271901E-4	38.161392	2
ATAGCAC	95	1.02796315E-4	38.156517	3
GATCTGA	570	0.0	38.156513	6
ATAGGGT	100	1.3901987E-4	36.248688	4
GATCTAC	325	0.0	35.69102	6
ATCTGTG	225	2.0008883E-11	35.44316	7
TCTGTGC	205	2.910383E-10	35.364574	8