H2KH2AFXY_n01_p2g11.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H2KH2AFXY_n01_p2g11.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	674548
Sequences flagged as poor quality	0
Sequence length	151
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCTGATCGTCTTCGAGCCCCCAACTTTCGTTCTTGATTAATGAAAAC	1183	0.1753766966917106	No Hit
ACCATACTCCCCCCGGAACCCAAAAACTTTGATTTCTCATAAGGTGCCAG	1076	0.15951422285738004	No Hit
GGATAACATCATAGGATTTCGATCCTATTGTGTTGGCCTTCGGGATCGGA	962	0.14261401708996246	No Hit
ATGTTATCCCATGCTAATGTATCCAGAGCGTAGGCTTGCTTTGAGCACTC	951	0.14098329548082567	No Hit
TCATTACTCCGATCCCGAAGGCCAACACAATAGGATCGAAATCCTATGAT	884	0.13105071840699253	No Hit
CCTATAAGCAACATCCGCTGATCCCTGGTCGGCATCGTTTATGGTTGAGA	884	0.13105071840699253	No Hit
GTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGAGCCCCCAACT	787	0.11667071876278634	No Hit
CTCGTAGACAGCGCCTCGTGGTGCGACAGGGTCCGGGCACGACGGGGCTC	698	0.10347669847067963	No Hit
GTCTACGAGTCGGGTTGTTTGGGAATGCAGCCCCAATCGGGCGGTAAATT	694	0.10288370879462988	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTTCCGA	1200	0.0	58.625057	1
TTCCGAT	1235	0.0	56.368004	2
CCGATCT	1255	0.0	54.879692	4
TCCCCCC	495	0.0	49.797268	8
CCCCCCG	510	0.0	46.91109	9
ACTCCCC	595	0.0	42.646446	6
CTCCCCC	605	0.0	40.74322	7
TGCCTAC	190	1.2914825E-10	38.171497	1
CGATCTG	825	0.0	37.78734	5
TTAGGGG	135	4.965859E-7	37.59484	3
CCATACT	740	0.0	37.23748	2
GTACAGG	120	9.535901E-6	36.26292	1
ATACTCC	700	0.0	36.24948	4
TAGGGGG	100	1.3910866E-4	36.249477	4
GGTCGCG	290	0.0	34.9995	7
GTCGCGC	295	0.0	34.406284	8
ACCATAC	780	0.0	34.403282	1
GGGCGAC	490	0.0	34.030125	7
TCTTCCG	830	0.0	33.1923	5
TCCGATC	2105	0.0	32.721672	3