H2KH2AFXY_n01_p2d7.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H2KH2AFXY_n01_p2d7.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	304594
Sequences flagged as poor quality	0
Sequence length	151
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCTGATCGTCTTCGAGCCCCCAACTTTCGTTCTTGATTAATGAAAAC	453	0.14872256183641175	No Hit
CTCGTAGACAGCGCCTCGTGGTGCGACAGGGTCCGGGCACGACGGGGCTC	430	0.14117152668798466	No Hit
ACCATACTCCCCCCGGAACCCAAAAACTTTGATTTCTCATAAGGTGCCAG	419	0.1375601620517804	No Hit
ATGTTATCCCATGCTAATGTATCCAGAGCGTAGGCTTGCTTTGAGCACTC	380	0.12475623288705621	No Hit
GTTTAAGCATATCAATAAGCGGAGGAAAAGAAACTAACAAGGATTCCCTT	336	0.11031077434223918	No Hit
TCATTACTCCGATCCCGAAGGCCAACACAATAGGATCGAAATCCTATGAT	335	0.10998246846622062	No Hit
GGATAACATCATAGGATTTCGATCCTATTGTGTTGGCCTTCGGGATCGGA	316	0.10374465682186781	No Hit
GTCTACGAGTCGGGTTGTTTGGGAATGCAGCCCCAATCGGGCGGTAAATT	306	0.10046159806168212	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGATCTG	305	0.0	54.669407	5
CCGATCT	495	0.0	54.189217	4
TTCCGAT	500	0.0	53.647327	2
AGGGGGC	45	0.009634646	48.330925	5
TATAATA	45	0.009634646	48.330925	2
CCTAATA	60	4.9408444E-4	48.33092	2
CTTCCGA	560	0.0	47.907265	1
GTATTAC	80	3.7259808E-5	45.317684	1
CTTAATA	80	3.729597E-5	45.31024	3
TAATACA	65	7.330317E-4	44.613163	4
TCCCCCC	165	2.7284841E-11	43.937202	8
CCAGGGG	70	0.0010557417	41.426506	3
CCCCCCG	185	9.640644E-11	39.187237	9
GTGCTCT	315	0.0	39.13146	1
GTACGGG	75	0.0014809319	38.67109	1
TCTTCCG	320	0.0	38.513706	5
CGTACAC	95	1.0275091E-4	38.15599	3
TATATAA	100	1.3895854E-4	36.248196	2
TACGGGG	80	0.0020348933	36.248196	2
GTACCGT	105	1.8512402E-4	34.52209	6