Basic Statistics
Measure | Value |
---|---|
Filename | H2KCKBGXG_n01_June2020-RS2-12.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 18074668 |
Sequences flagged as poor quality | 0 |
Sequence length | 76 |
%GC | 37 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CGTATAA | 13510 | 0.0 | 62.665726 | 5 |
GGTATAG | 22290 | 0.0 | 62.397526 | 5 |
CGTATAG | 13105 | 0.0 | 62.22551 | 5 |
GTTATAG | 27440 | 0.0 | 61.923386 | 5 |
CTATACG | 7605 | 0.0 | 61.713524 | 6 |
CGGATAG | 8410 | 0.0 | 61.299416 | 5 |
TTATAGC | 18770 | 0.0 | 61.177643 | 6 |
CTATAGG | 15530 | 0.0 | 61.163055 | 6 |
GTATAAG | 19420 | 0.0 | 60.80603 | 6 |
ATTATAG | 31730 | 0.0 | 60.68762 | 5 |
TATAGGG | 29490 | 0.0 | 60.31213 | 7 |
TTATAAC | 12480 | 0.0 | 60.069733 | 6 |
TATACGC | 7675 | 0.0 | 59.918613 | 7 |
CGTTATA | 16475 | 0.0 | 59.842678 | 4 |
TATAGCG | 15315 | 0.0 | 59.621357 | 7 |
GTTATAA | 24345 | 0.0 | 59.5025 | 5 |
GGATAGT | 16275 | 0.0 | 59.30947 | 6 |
TATAAGC | 20860 | 0.0 | 59.27535 | 7 |
TTTATAG | 34670 | 0.0 | 59.175446 | 5 |
CCTATAC | 6425 | 0.0 | 59.157017 | 5 |