| Lane | Sample ID | Sample Ref | Index | Description | Control | Project | Yield (Mbases) | % PF | # Reads | % of raw clusters per lane | % Perfect Index Reads | % One Mismatch Reads (Index) | % of >= Q30 Bases (PF) | Mean Quality Score (PF) |
|---|
| 1 | MRP17 | AGTCAA | N | lane_1 | 1,317 | 100.00 | 25,827,618 | 7.27 | 97.48 | 2.52 | 90.42 | 36.54 | ||
| 1 | MRP19 | ATCACG | N | lane_1 | 1,073 | 100.00 | 21,029,854 | 5.92 | 97.53 | 2.47 | 94.25 | 37.51 | ||
| 1 | MRP20 | CGATGT | N | lane_1 | 1,100 | 100.00 | 21,576,326 | 6.08 | 97.97 | 2.03 | 93.81 | 37.40 | ||
| 1 | MRP21 | TTAGGC | N | lane_1 | 838 | 100.00 | 16,438,982 | 4.63 | 98.36 | 1.64 | 93.40 | 37.26 | ||
| 1 | MRP22 | TGACCA | N | lane_1 | 856 | 100.00 | 16,789,232 | 4.73 | 97.00 | 3.00 | 93.45 | 37.31 | ||
| 1 | MRP23 | GATCAG | N | lane_1 | 2,083 | 100.00 | 40,848,540 | 11.50 | 98.04 | 1.96 | 94.16 | 37.49 | ||
| 1 | MRP24 | TAGCTT | N | lane_1 | 2,124 | 100.00 | 41,650,744 | 11.73 | 98.29 | 1.71 | 94.55 | 37.61 | ||
| 1 | MRP25 | ATGTCA | N | lane_1 | 2,438 | 100.00 | 47,803,124 | 13.46 | 97.80 | 2.20 | 93.43 | 37.25 | ||
| 1 | MRP26 | CCGTCC | N | lane_1 | 2,097 | 100.00 | 41,113,112 | 11.58 | 97.89 | 2.11 | 93.68 | 37.28 | ||
| 1 | MRP27 | GTAGAG | N | lane_1 | 1,726 | 100.00 | 33,838,052 | 9.53 | 98.18 | 1.82 | 93.98 | 37.44 | ||
| 1 | MRP28 | ACAGTG | N | lane_1 | 581 | 100.00 | 11,389,078 | 3.21 | 97.64 | 2.36 | 93.91 | 37.44 | ||
| 1 | MRP29 | GCCAAT | N | lane_1 | 337 | 100.00 | 6,609,790 | 1.86 | 96.60 | 3.40 | 93.90 | 37.43 | ||
| 1 | MRP30 | CAGATC | N | lane_1 | 500 | 100.00 | 9,804,264 | 2.76 | 97.30 | 2.70 | 93.90 | 37.43 | ||
| 1 | MRP31 | ACTTGA | N | lane_1 | 518 | 100.00 | 10,165,338 | 2.86 | 97.91 | 2.09 | 92.81 | 37.16 | ||
| 1 | lane1 | unknown | Undetermined | Clusters with unmatched barcodes for lane 1 | N | Undetermined_indices | 521 | 100.00 | 10,217,904 | 2.88 | 0.00 | 0.00 | 82.02 | 34.72 |
| 2 | MRP15 | GGCTAC | N | lane_2 | 729 | 100.00 | 14,286,058 | 5.23 | 97.88 | 2.12 | 96.13 | 38.19 | ||
| 2 | MRP16 | CTTGTA | N | lane_2 | 1,355 | 100.00 | 26,570,226 | 9.74 | 98.82 | 1.18 | 96.45 | 38.31 | ||
| 2 | MRP18 | AGTTCC | N | lane_2 | 1,289 | 100.00 | 25,272,376 | 9.26 | 98.39 | 1.61 | 96.54 | 38.28 | ||
| 2 | SE377 | GCCAAT | N | lane_2 | 986 | 100.00 | 19,337,106 | 7.08 | 97.52 | 2.48 | 96.80 | 38.39 | ||
| 2 | SE378 | TGACCA | N | lane_2 | 906 | 100.00 | 17,761,866 | 6.51 | 97.41 | 2.59 | 96.74 | 38.38 | ||
| 2 | SE379 | CAGATC | N | lane_2 | 1,592 | 100.00 | 31,210,660 | 11.44 | 98.56 | 1.44 | 96.73 | 38.37 | ||
| 2 | lane2 | unknown | Undetermined | Clusters with unmatched barcodes for lane 2 | N | Undetermined_indices | 7,063 | 100.00 | 138,493,008 | 50.74 | 0.00 | 0.00 | 95.08 | 37.84 |
| SampleID | Recipe | Operator | Directory |
|---|
| MRP17 | /export/data1/gencore/demux/H2K7VBCXX/bcl2fastq/Unaligned/Project_lane_1/Sample_MRP17 | ||
| MRP19 | /export/data1/gencore/demux/H2K7VBCXX/bcl2fastq/Unaligned/Project_lane_1/Sample_MRP19 | ||
| MRP20 | /export/data1/gencore/demux/H2K7VBCXX/bcl2fastq/Unaligned/Project_lane_1/Sample_MRP20 | ||
| MRP21 | /export/data1/gencore/demux/H2K7VBCXX/bcl2fastq/Unaligned/Project_lane_1/Sample_MRP21 | ||
| MRP22 | /export/data1/gencore/demux/H2K7VBCXX/bcl2fastq/Unaligned/Project_lane_1/Sample_MRP22 | ||
| MRP23 | /export/data1/gencore/demux/H2K7VBCXX/bcl2fastq/Unaligned/Project_lane_1/Sample_MRP23 | ||
| MRP24 | /export/data1/gencore/demux/H2K7VBCXX/bcl2fastq/Unaligned/Project_lane_1/Sample_MRP24 | ||
| MRP25 | /export/data1/gencore/demux/H2K7VBCXX/bcl2fastq/Unaligned/Project_lane_1/Sample_MRP25 | ||
| MRP26 | /export/data1/gencore/demux/H2K7VBCXX/bcl2fastq/Unaligned/Project_lane_1/Sample_MRP26 | ||
| MRP27 | /export/data1/gencore/demux/H2K7VBCXX/bcl2fastq/Unaligned/Project_lane_1/Sample_MRP27 | ||
| MRP28 | /export/data1/gencore/demux/H2K7VBCXX/bcl2fastq/Unaligned/Project_lane_1/Sample_MRP28 | ||
| MRP29 | /export/data1/gencore/demux/H2K7VBCXX/bcl2fastq/Unaligned/Project_lane_1/Sample_MRP29 | ||
| MRP30 | /export/data1/gencore/demux/H2K7VBCXX/bcl2fastq/Unaligned/Project_lane_1/Sample_MRP30 | ||
| MRP31 | /export/data1/gencore/demux/H2K7VBCXX/bcl2fastq/Unaligned/Project_lane_1/Sample_MRP31 | ||
| lane1 | /export/data1/gencore/demux/H2K7VBCXX/bcl2fastq/Unaligned/Undetermined_indices/Sample_lane1 | ||
| MRP15 | /export/data1/gencore/demux/H2K7VBCXX/bcl2fastq/Unaligned/Project_lane_2/Sample_MRP15 | ||
| MRP16 | /export/data1/gencore/demux/H2K7VBCXX/bcl2fastq/Unaligned/Project_lane_2/Sample_MRP16 | ||
| MRP18 | /export/data1/gencore/demux/H2K7VBCXX/bcl2fastq/Unaligned/Project_lane_2/Sample_MRP18 | ||
| SE377 | /export/data1/gencore/demux/H2K7VBCXX/bcl2fastq/Unaligned/Project_lane_2/Sample_SE377 | ||
| SE378 | /export/data1/gencore/demux/H2K7VBCXX/bcl2fastq/Unaligned/Project_lane_2/Sample_SE378 | ||
| SE379 | /export/data1/gencore/demux/H2K7VBCXX/bcl2fastq/Unaligned/Project_lane_2/Sample_SE379 | ||
| lane2 | /export/data1/gencore/demux/H2K7VBCXX/bcl2fastq/Unaligned/Undetermined_indices/Sample_lane2 |
bcl2fastq-1.8.4