H2K2WBGXG_n01_0722_plasmid_20200710.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H2K2WBGXG_n01_0722_plasmid_20200710.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	9864423
Sequences flagged as poor quality	0
Sequence length	151
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGATAACGCATTTCTTGTGGAAAGGACGAAACTCCGCCAGTAGGTCC	7013982	71.10382431896929	No Hit
GATCGATAACGCATTTCTTGTGGAAAGGACGAAACACCGCCAGTAGGTCC	2254588	22.85575142104105	No Hit
GATCGATAACGCATTTCTTGTGGAAAGGACGAAACTCCGCCAGTAGGTCA	14057	0.14250199935667804	No Hit
GATCGATAACGCATTTCTTGTGGAAAGGAAGAAAAACCGCCAGTAGGTCC	13082	0.13261799499068522	No Hit
GATCGATAACGCATTTCTTGTGGAAAGGAAGAAACTCCGCCAGTAGGTCC	12880	0.130570232034859	No Hit
GATCGATAACGCATTTCTTGTGGAAAGGACGAAACTCCCCCAGTAGGTCC	11183	0.11336699571784382	No Hit
GATCGATAACGCATTTCTTGTGGAAGGACGAAACACCGCCAGTAGGTCCA	9884	0.10019846067022876	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGATAAC	981560	144.85939	4
ATAACGC	981765	144.85275	6
GATAACG	980930	144.83267	5
GATCGAT	980430	144.79865	1
ATCGATA	982330	144.76137	2
ACGCATT	981605	144.75165	9
AACGCAT	982155	144.74214	8
TAACGCA	982270	144.73479	7
TCGATAA	982560	144.72379	3
CGTCTGA	951925	134.27573	145
GTCTGAA	73205	118.06063	145
CTCTGAA	3280	99.46536	145
CGTCTAA	4470	89.36701	145
CGTTGAA	2895	79.13556	145
CGACTGA	3030	78.2417	145
CGCTGAA	2370	78.00546	145
CGTCAGA	2445	77.6883	145
CGTCGAA	3535	76.08826	145
TCTGAAC	12405	70.48289	145
AATAACG	2235	66.18416	5