H2K2WBGXG_n01_0722_CD8_high_d1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H2K2WBGXG_n01_0722_CD8_high_d1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	9966509
Sequences flagged as poor quality	0
Sequence length	151
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGATAACGCATTTCTTGTGGAAAGGACGAAACTCCGCCAGTAGGTCC	7050253	70.73944347012579	No Hit
GATCGATAACGCATTTCTTGTGGAAAGGACGAAACACCGCCAGTAGGTCC	2249131	22.56688876717013	No Hit
GATCGATAACGCATTTCTTGTGGAAAGGACGAAACTCCTCCAGTAGGTCC	17922	0.17982224267293592	No Hit
GATCGATAACGCATTTCTTGTGGAAAGGACGAAACTCCACCAGTAGGTCC	15344	0.15395561274263636	No Hit
GATCGATAACGCATTTCTTGTGGAAAGGACGAAACTCCGCCAGTAGGTCA	13617	0.13662757942625647	No Hit
GATCGATAACGCATTTCTTGTGGAAAGGAAGAAAAACCGCCAGTAGGTCC	12838	0.12881140226733354	No Hit
GATCGATAACGCATTTCTTGTGGAAAGGAAGAAACTCCGCCAGTAGGTCC	12731	0.12773780668838006	No Hit
GATCGATAACGCATTTCTTGTGGAAAAGACGAAACTCCGCCAGTAGGTCC	11738	0.11777443837155015	No Hit
GATCGATAACGCATTTCTTGTGGAAAGGACAAAACTCCGCCAGTAGGTCC	11674	0.1171322877448864	No Hit
GATCGATAACGCATTTCTTGTGGAAAGGACGAAACTCCCCCAGTAGGTCC	11454	0.11492489496572973	No Hit
GATCGATAACGCATTTCTTGTGGAAAGAACGAAACTCCGCCAGTAGGTCC	10981	0.11017900049054288	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGATAAC	991445	144.84425	4
ATAACGC	991785	144.83188	6
GATAACG	990505	144.8287	5
AACGCAT	991475	144.82387	8
TCGATAA	991740	144.80338	3
ACGCATT	991465	144.7954	9
TAACGCA	992090	144.74721	7
ATCGATA	993820	144.5397	2
GAGCACA	964335	131.13171	145
AGCACAC	93070	110.061035	145
TTACCTA	8720	104.17572	145
GAGCACC	2925	96.91317	145
GAGCCAC	1515	87.57303	145
AACACAT	2040	79.96853	8
GATCGAT	1963920	72.99434	1
GATCAAT	2325	72.66145	1
ATCAATA	2370	71.28574	2
AATAACG	2365	71.13129	5
CAATAAC	2410	70.10328	4
ACACATT	2335	69.551094	9