H2K2WBGXG_n01_0722_CD8_IL2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H2K2WBGXG_n01_0722_CD8_IL2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	5791488
Sequences flagged as poor quality	0
Sequence length	151
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGATAACGCATTTCTTGTGGAAAGGACGAAACTCCGCCAGTAGGTCC	4118048	71.10518056844803	No Hit
GATCGATAACGCATTTCTTGTGGAAAGGACGAAACACCGCCAGTAGGTCC	1316038	22.723659273747955	No Hit
GATCGATAACGCATTTCTTGTGGAAAGGACGAAACTCCGCCAGTAGGTCA	8192	0.14144896786456262	No Hit
GATCGATAACGCATTTCTTGTGGAAAGGAAGAAAAACCGCCAGTAGGTCC	7544	0.13026013349246343	No Hit
GATCGATAACGCATTTCTTGTGGAAAGGAAGAAACTCCGCCAGTAGGTCC	7483	0.1292068635901516	No Hit
GATCGATAACGCATTTCTTGTGGAAAGGACGAAACTCCACCAGTAGGTCC	6871	0.1186396311276135	No Hit
GATCGATAACGCATTTCTTGTGGAAAGGACGAAACTCCCCCAGTAGGTCC	6447	0.11131854197056093	No Hit
GATCGATAACGCATTTCTTGTGGAAAGGACAAAACTCCGCCAGTAGGTCC	5849	0.10099304358396322	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ATAACGC	575800	144.85556	6
GATAACG	575315	144.84154	5
CGATAAC	576040	144.83675	4
AACGCAT	576160	144.73238	8
TAACGCA	576115	144.72983	7
ACGCATT	576235	144.67589	9
TCGATAA	578555	144.2247	3
CACACGT	558740	131.33488	145
ACACGTC	52640	121.28159	145
CACACTC	2500	87.2888	145
CACACGC	1615	86.19077	145
CACGTCT	8685	81.38921	145
CACAGTC	1830	78.83772	145
AATAACG	1290	74.761246	5
ATCGATA	1140830	73.166855	2
GATCGAT	1140795	73.05155	1
CCACGTC	995	69.22016	145
AACACGT	1325	67.84813	145
AACACAT	1355	67.42478	8
GATAACA	1485	66.897316	5