FastQCFastQC Report
Wed 28 Aug 2019
H2HY7BGXC_n02_S28.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH2HY7BGXC_n02_S28.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences244
Sequences flagged as poor quality0
Sequence length25
%GC15

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTTTTTTTTTTTTTTTTTTTTTTT3413.934426229508196No Hit
TTTTTTTTTTTTTTTTTTTTTTTTG72.8688524590163933No Hit
TTTTTTTTTTTTTTTTTTTTTTTGT72.8688524590163933No Hit
TTTTTTTTTTTTTTTTTTTTTATTT41.639344262295082No Hit
TTTTTTTTTTTTTTTTTTTTTTGTT41.639344262295082No Hit
TTTTTTTTTTTTTTTTTTTTTTTTA31.2295081967213115No Hit
TTTTTTTTTTTTTTTTTTTTTTTTC31.2295081967213115No Hit
TTTTTTTTTTTTTTTTTTTTTTTAA31.2295081967213115No Hit
TGTTTTTTTTTTTTTTTTTTTTTGT20.819672131147541No Hit
TGTTTTTTTTTGTTTTGTTTTTGTT20.819672131147541No Hit
TTGTTTTTTTTTTTTTTTTTTTGTT20.819672131147541No Hit
TTTTTTGTGTTTTTTTGTTTTTTTG20.819672131147541No Hit
TTTTTTTTTTGTTTTTTTTTTTGTT10.4098360655737705No Hit
TTTGGTGTGTTTGGTTTTGTTTTTT10.4098360655737705No Hit
TTTTTTTGTTTTTTTTTTTTTTGTT10.4098360655737705No Hit
TTTTTTTTTTTTTTTTTTTTTTGCC10.4098360655737705No Hit
TAAAAAAATATAACCATAATTTTGT10.4098360655737705No Hit
TGGTTTGGTGTGTTGTTTTGGTTTT10.4098360655737705No Hit
TTTTGTGTGTTGTGTTTTTTTTTTT10.4098360655737705No Hit
TTTTTTTTTTTTTTTGTTTTTTTTA10.4098360655737705No Hit
AGAATATTATTACTAAAATCCCCCA10.4098360655737705No Hit
TTTTGTTTTTTTTGTTTTTTTGTGG10.4098360655737705No Hit
TTTTTTGTTTTTTGTTTTTTTTTTG10.4098360655737705No Hit
TTTGTTTTTTTGTGTTTTTTTTTTT10.4098360655737705No Hit
TTGTTGTTTGGTTTCTTTTGGTTTG10.4098360655737705No Hit
TTTTTTTTGTTTTTTTTTTTTTAAT10.4098360655737705No Hit
TTATATATTTTTTTTTTTTTTTCCC10.4098360655737705No Hit
TTTATATAATTTTTTTATTTTTTTA10.4098360655737705No Hit
TTTTTTTTGTTTTTTTTTTTTGGTT10.4098360655737705No Hit
TTTTCGCGTGGTTGTGTGTTGGTTT10.4098360655737705No Hit
TCTATTATCTTTTTCCCTCCTCCTT10.4098360655737705No Hit
TCCATGTCTGTTCCTGGTCTCTCCT10.4098360655737705No Hit
TGTTTTGTGTTTTTTTTTTTTTTTT10.4098360655737705No Hit
AGTATTTCGGTCTGTGGTTGTGTTT10.4098360655737705No Hit
TTTTTTTTGTTGTTTTGTTTTTTTT10.4098360655737705No Hit
TTTTTATATTTTTTTTTTGGTTTTG10.4098360655737705No Hit
TTTTTTTTTTTTTGTGTTGTTGTTT10.4098360655737705No Hit
CCCCCGGCCTCGCCTTTTCTTTTAT10.4098360655737705No Hit
TTGGTGGTGGTTTTGTTTGGGGTGG10.4098360655737705No Hit
TTTATTTTTTTTTTATTTTACTTGC10.4098360655737705No Hit
TTTTGTTTTGGTGTTTGTTTTTGTT10.4098360655737705No Hit
TTTTTTTTTTTTTTTTTTTTTGTTG10.4098360655737705No Hit
TTTTTTGTTTTTTTTTTTGTTTTTT10.4098360655737705No Hit
TTATTTTTTTTTTTTTTTTTTTTTT10.4098360655737705No Hit
TTTTTTGTTTGTTGTTTGTTTTTTT10.4098360655737705No Hit
CTGGTGTTGGTTGGGGTGGTTTTTG10.4098360655737705No Hit
TGGAATATTATAATATATATACATC10.4098360655737705No Hit
TCTTCCTCTTTTTTTTTTCATCATC10.4098360655737705No Hit
TTTTTTTTTTTTGTGTTGTTTTTTG10.4098360655737705No Hit
TTGGTTTTTTGTTTTTTTTTTTGTT10.4098360655737705No Hit
TTTTTTTTTTTTTTTTTTTTTTAGA10.4098360655737705No Hit
TTTGTTTGTTGTTCGTTTTTTGGTT10.4098360655737705No Hit
TTTTTTTTTTTTGTTTTGTTTTTTT10.4098360655737705No Hit
GTTTATTTATTTTTTTTTTTTGTTT10.4098360655737705No Hit
TTTTTCTTTTCTGTTTTTTTTTTTT10.4098360655737705No Hit
TGTGTGTGGTTGTTGTTGTTTTTGT10.4098360655737705No Hit
TTTTGGTTTTTTTTTTTTTTTTGTT10.4098360655737705No Hit
TTTTTTGTTTTTCTCTGTTTTTTTT10.4098360655737705No Hit
TGGGGGGTTGTTTTTTTTTTTTGGG10.4098360655737705No Hit
CTCCTCCTGTTTCTTCGCGTTTTGT10.4098360655737705No Hit
TTTTGTTTTGTTGTGTTGTTTTTTT10.4098360655737705No Hit
CTGGGGGGGTGGGTGGGGGGGTGGG10.4098360655737705No Hit
TTTAATATTTTTTTTTTGTTTTTTT10.4098360655737705No Hit
TTTTTTTTTTTGTTTTTTGTTTGTT10.4098360655737705No Hit
TTTTGTTTTTTTTTTTTTTGTTTGT10.4098360655737705No Hit
TTTTGTTGGGGTGGTTGTGTTTGGG10.4098360655737705No Hit
TTTTGTTGTGTTGTGGTGTTTTTGT10.4098360655737705No Hit
TTTTGTTTTGTTTTTTTTTTTTTTG10.4098360655737705No Hit
TTTTTTTGTTTGTTTTTTTTTTGTT10.4098360655737705No Hit
TTTTTTTTTGTGTGTGTTGTTGTTT10.4098360655737705No Hit
TTTATTATTTTTTTATTTTAACCAC10.4098360655737705No Hit
TTTTTTTTGTTGTTTGTTGTTTTTG10.4098360655737705No Hit
TTTTTTTTGTTGTTTTGTTTTTGTT10.4098360655737705No Hit
TTTTTTTTAATTTTATATTATTATT10.4098360655737705No Hit
TTGTGTTTTTTTGTTGTTTTTGTGT10.4098360655737705No Hit
TTTGTTGTGGTGTGTGTTGTGTTGG10.4098360655737705No Hit
TTGTTTTTGTTTTTTTTTTTTTTGT10.4098360655737705No Hit
TTTTTGTTTTTCTGTTGTTTTTGGT10.4098360655737705No Hit
TTTTTTTATTTTTTTTTCCCGTTTT10.4098360655737705No Hit
TCGGGTTTGTGTTTGTTGGTTTTTT10.4098360655737705No Hit
CCCCGTCGGGCGGGGGGGGGGGGGT10.4098360655737705No Hit
ACTAATTTTATTTATTATTAATTAT10.4098360655737705No Hit
TTTTTTTTTTTTTTTTTTTTTTTAT10.4098360655737705No Hit
TTGTGTTTGTTTGGTGTGTTTTGGT10.4098360655737705No Hit
TTTTTTTTTTTGTTTTTTTTTTGTT10.4098360655737705No Hit
TCTTGTTTTTTTTTTTTTTTTTTTG10.4098360655737705No Hit
TTTTTTGTTGTTTGGGGGGGGGGTG10.4098360655737705No Hit
TTGTGTTTTTTTTTTTTTTTTTTTT10.4098360655737705No Hit
TTGGTGCTTTGTTGGGGTGGTTTGG10.4098360655737705No Hit
TTTTTTTGGTGTTTTGTTTTTGTTT10.4098360655737705No Hit
TTTTTTTGTTTTTTGTTTTTTGTTT10.4098360655737705No Hit
TTTGTTGTTTTTTTTTTTTTTTGCT10.4098360655737705No Hit
TTTTTTTTTTTTTTGTTTTTTTGTT10.4098360655737705No Hit
TTGTGTTTGGGGTTTTTTGTTGTTG10.4098360655737705No Hit
ATTATATAATAATTAATTATTTAAT10.4098360655737705No Hit
TTTTTTTTATTTTTTTGTTTTTTTT10.4098360655737705No Hit
TGGGGGCGGGTGGGTGGGGGGTTGT10.4098360655737705No Hit
TTTTTGTTTTTTTTTGTTTTTTTTT10.4098360655737705No Hit
TTTTTTTGGTGTTTTTTGTTTTGTT10.4098360655737705No Hit
TTTTTTTTTTTTTTTTTTTTTTGGG10.4098360655737705No Hit
TTTAATTATTTTTTTATTTTTTTTT10.4098360655737705No Hit
TTGTTTTTTTTTTTTTTGTTTTGTT10.4098360655737705No Hit
TTTGGTGGGTTGGCTTTTGTTGTTT10.4098360655737705No Hit
TCTTTGGGTCGTTGTTTTTGTGTTT10.4098360655737705No Hit
TTTTTTTTTTTTTTTTTGTTTTTGG10.4098360655737705No Hit
TTTTTTGTTTTGGTTGTTTGTTGTT10.4098360655737705No Hit
TTTTTTTTTTTTTTTTGTTTTGTTT10.4098360655737705No Hit
TTTTTTTTTGTGTTTTTTTTTTGTT10.4098360655737705No Hit
TGTTTGGTTTTTTTTGTGTTTGTTT10.4098360655737705No Hit
TTTTTTTTTTTGTTTTTTGTTTTTT10.4098360655737705No Hit
TTGGTTGTGTTTGTGTGTGGTTTGG10.4098360655737705No Hit
CTTCCTTGTATCCTCCTGCTTCCTT10.4098360655737705No Hit
TTTTTTTTTTTTGGTTTTTTGTTTT10.4098360655737705No Hit
TTTTTGTTTTTTTTTTTTTTTTGTT10.4098360655737705No Hit
TTTTTTTTTTGTTTTGGTTTTTGTT10.4098360655737705No Hit
TTTTTTTTTTTGTTGTTGTTTTTGT10.4098360655737705No Hit
TGGGTTTAGGTCTTTCTCCTATTTT10.4098360655737705No Hit
TTTTTTTTTTTTTTTTGTTTTTTTT10.4098360655737705No Hit
ATTATTATTTATTTTTTTTTTTTTT10.4098360655737705No Hit
TTTTTTGGCTGGTTTGTGTGTTTGG10.4098360655737705No Hit
TTTTTTTTTTTTTTTTTTTTTAATT10.4098360655737705No Hit
TTTTTTTTTTGTTTTTGTTTTTTGT10.4098360655737705No Hit
TTGTGCTTTGTTGTTTTTGTTTGTT10.4098360655737705No Hit
TTGTGTGTGGTGTTGGGTGGTTTGT10.4098360655737705No Hit
TCTTTTTTGTGTTTTTTTTTTTTTT10.4098360655737705No Hit
TAATGGTTCGCTGGTCGTTGTGGTT10.4098360655737705No Hit
TGTTGGTTTGTGGGTGGGGTTTTGT10.4098360655737705No Hit
TTTTTGTTGTTGTGTGTTTTTTGTT10.4098360655737705No Hit
TGTTTGTTGTTGTGTGTTTTTTGTT10.4098360655737705No Hit
CTTTTTTTTTTTTTTTTTTTATTTT10.4098360655737705No Hit
TTTTTTTTTTTTTTTTATTTTTTAC10.4098360655737705No Hit
TTTGTGGTGTTGTTTTGTTTTTTGT10.4098360655737705No Hit
TTGTTTTCTTGGTTGTTGTTTTGGG10.4098360655737705No Hit
AGTGTTTTGTTTTGTTTTTTTTTTT10.4098360655737705No Hit
TTTTGTTTTTTGTTTTTTGTTTTTT10.4098360655737705No Hit
TTTCTACTACTCATTTTCTCTTCTT10.4098360655737705No Hit
TTATATTTATTTTATTATTTTTTTT10.4098360655737705No Hit
TGTTTTGTTTTTTTGTGTTTTTTTG10.4098360655737705No Hit
TTTTTATTTTTGTTTTTTTTGTTTT10.4098360655737705No Hit
CCATATGAAATTAATAAATAATTCA10.4098360655737705No Hit
TTTTTTTGTTGTGTTGTTGTTTTTT10.4098360655737705No Hit
TTTTTTGTTTTTGTGTTGTTTTTTG10.4098360655737705No Hit
TTTTTTGGTTTGTTTTTTGTTTTTT10.4098360655737705No Hit
TTTGTGTTTTTTGTGTGTCTTCGTA10.4098360655737705No Hit
TTTTTCGTGGTTTTGTGTGGTGTGT10.4098360655737705No Hit
TATTTGTTGTCTTTGTGTTTTTAAG10.4098360655737705No Hit
TTTTTTTTTTTTTTAATCCCCCAAC10.4098360655737705No Hit
TTTTTTTTGTTTGTTTGTTTTTGGT10.4098360655737705No Hit
TTTTTTTTTTTTTTTTTTTTGTTAT10.4098360655737705No Hit
TTTTTTTTTTTTTTTTTTTTTTTGG10.4098360655737705No Hit
TTTTTTTGTTTTTTTTTTTTTTTGT10.4098360655737705No Hit
TTTTTGTGTTGTTTTGTTTGTTTGT10.4098360655737705No Hit
TTTTTTGTTTTTTTTGTTTTTGTTT10.4098360655737705No Hit
TTTTTTTTGTTGTTTTTGTTTTTTG10.4098360655737705No Hit
TTTTTTTTTTTTTGTTTTTTTTTTT10.4098360655737705No Hit
TTTGTTTGGGGTGTGGGTTTGTGGG10.4098360655737705No Hit
TTTTTTTTTTTCTTTTTTTTTTTAT10.4098360655737705No Hit
TGTTGTTTTTTTTTTTTTGGTTGTT10.4098360655737705No Hit
TTGGTGGTGTCTTTTGTGTTTGTTG10.4098360655737705No Hit
TTTTTTTTTTTTTTGTTTTGTTTTT10.4098360655737705No Hit
TTGTGGCTGTGGGGGGGGGGGGGGG10.4098360655737705No Hit
TTTTTTTTTTTTTTTTTTTTTTCTT10.4098360655737705No Hit
CGGCGGTCGTGCCGTGTTGGTTTGT10.4098360655737705No Hit
TGTTGTTGTTTGTTTTTTTTTTTGT10.4098360655737705No Hit
TTGTTGTGTTTGTTGGGTTTTTGGT10.4098360655737705No Hit
TTTTTCCTGTCTTTGTGTTTTTTTG10.4098360655737705No Hit
TTATTTTATTTTTTTTTTTTTTTTT10.4098360655737705No Hit
TTTAATTTTTTTTTTTTTTTTTTTT10.4098360655737705No Hit
TTTTTTTTTATATTTTTTTTTTTTT10.4098360655737705No Hit
TTTTTTTTTTTTTTTTTTTTTGGTT10.4098360655737705No Hit
TTTTTTTTTTTTTGTTTTTTTTGTT10.4098360655737705No Hit
TTTTTTGTTTTTTTTTTTTGTTTCT10.4098360655737705No Hit
TGTTTTTTTTTTTGGGTTTTTTGTT10.4098360655737705No Hit
TTTTTTTTTTTTTTTTTTTTTAAAT10.4098360655737705No Hit
CTGTGTTGTGGTGGTGTGCGTGATT10.4098360655737705No Hit
ATTTTATTTTTTTTTTTTTTTTTTT10.4098360655737705No Hit
TTTTTTTGTTTTTTTGGTTTTGTTT10.4098360655737705No Hit
TCTTTGTTTGTTTTGTTTTTTTTGT10.4098360655737705No Hit
ATAAATTATTTTATATTATATTTGA10.4098360655737705No Hit
TTTTTTTATTTTTTTTTTTTTTTGT10.4098360655737705No Hit
TTTTTTTTTGTTTTTTTTTTTTTTT10.4098360655737705No Hit
TTTGTTTTGTTTGGTGTTTTTTGTT10.4098360655737705No Hit
TATTTTATTTTTTTTTTTTTTTTTA10.4098360655737705No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers