FastQCFastQC Report
Wed 28 Aug 2019
H2HY7BGXC_n02_Lu_RNAseq_Aug2019_Sample_8.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH2HY7BGXC_n02_Lu_RNAseq_Aug2019_Sample_8.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences294
Sequences flagged as poor quality0
Sequence length25
%GC18

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTTTTTTTTTTTTTTTTTTTTTTT4615.646258503401361No Hit
TTTTTTTTTTTTTTTTTTTTTTTGT93.061224489795918No Hit
TTTTTTTTTTTTTTTTTTTTTTGTT62.0408163265306123No Hit
TTTTTTTTTTTTTTTTTTTTTTTTA41.3605442176870748No Hit
TTGTTTTGTTGTTTTTTGTTTTTTG20.6802721088435374No Hit
TTTTTTTTTTTTTTTTTTTTTTTCT20.6802721088435374No Hit
TTTTTTTTTTTTTTTTTTTTTTTCA20.6802721088435374No Hit
TTTTTTTTTTTTTTTTTGTTTTTGT20.6802721088435374No Hit
TTTTTTTTTTTTTTTTTTTTTTAAA20.6802721088435374No Hit
TTTTGTTTTTGTTTTTTTTTTGTTT20.6802721088435374No Hit
TGTTTTTTTTTTTTTTTTTTTTTTT20.6802721088435374No Hit
TTTTTTTTTTTTTTTTTTTTTTTAC20.6802721088435374No Hit
TTTTTTTTTTTTTTTTTTTTAATTT20.6802721088435374No Hit
TGTGTTTTGTGTTGTTGTGTTTGTG10.3401360544217687No Hit
TATTTTTAATTATTTAATCATCAAA10.3401360544217687No Hit
TTTTTTTTTTTTTTTTTTTTTTCCC10.3401360544217687No Hit
TTTTTTTTTTTTATTTATTTTTTTA10.3401360544217687No Hit
TTTTTTTTTTTTTTTTATTTTTTTT10.3401360544217687No Hit
TTGGTGTTGGTTTTTTTTTGTTTTT10.3401360544217687No Hit
TGGTTGTTGTTGGGTGTTGTTTTTT10.3401360544217687No Hit
TCTCTTGTGCTTTGTTTTTTTTTTT10.3401360544217687No Hit
TATTATTATAATCAATAATATAATT10.3401360544217687No Hit
TTGGTTGTTGGTTTGTGTGTTTGGT10.3401360544217687No Hit
TTTTTATTTTTTTTTTTTTTTTTTT10.3401360544217687No Hit
TTTTTTTTGTTTTTGTTTTTTGTGG10.3401360544217687No Hit
TTTGTGTTTTTTGTGTTGTTTTTTG10.3401360544217687No Hit
TTTTTTTTTTTTTTTTTTTTTTTTC10.3401360544217687No Hit
TTTTTTTTTGTTGTTTTTTTTTTTT10.3401360544217687No Hit
TTTTTTGTTTTTTGTTTGTTTTTTT10.3401360544217687No Hit
TTTTTTTTTTTTTTTTTTTTTTTTG10.3401360544217687No Hit
TTGTGGTTTTGTGTGGTTTTTTGTG10.3401360544217687No Hit
TTTTGTTGTTTTTGGGTGGGGGTTG10.3401360544217687No Hit
TTTTTTGTTTTTGTTTTTTTTGTTT10.3401360544217687No Hit
TTGTTTTTTTTTTTTTTTTTTTTTA10.3401360544217687No Hit
TTGTTGTTTGTGTGTGTTGTTGTGT10.3401360544217687No Hit
TTGTGGTTTTGTGTTGTTTTTTGTT10.3401360544217687No Hit
TTTTTGTGTTTTTTGTTTTTTTTTG10.3401360544217687No Hit
TGTTTGTTTGTTTTTTTTGTTTGTT10.3401360544217687No Hit
TTTGTGTTTTTTTTTTGGTTGTTTT10.3401360544217687No Hit
TTTTTTTTGTTTGTTTTTTTTTGGT10.3401360544217687No Hit
TTTTGGTGGTGGGTGGGGGGTGTTG10.3401360544217687No Hit
GGGGGGGGCGGGGTGGGCCTTTTTG10.3401360544217687No Hit
TTTTTTTTTATTTTTTTTTTTTTTT10.3401360544217687No Hit
TTTGTGTTTTGTTGTGTTTTTTTGT10.3401360544217687No Hit
TTTTTTTTTTTTTTTTGTTTGGGGG10.3401360544217687No Hit
TGTGGGGGGTGTGGGGGTTTTTTGG10.3401360544217687No Hit
TGTTTGTTGTTTTTTTTTTTTTTTT10.3401360544217687No Hit
TGTGTTTGTGTTTTGGGTGTGTTGG10.3401360544217687No Hit
TTTTTTTTTTTTTTTTTTTTTGCGC10.3401360544217687No Hit
TTTTTTGTTTTTTTTTGGGTTTTGT10.3401360544217687No Hit
TTCTCGTTTTGGTGGGGTTGTTGTT10.3401360544217687No Hit
TTTGTGTCGGGTGGTTGGTGGGGTG10.3401360544217687No Hit
TTTTTTTTTTTGTTTTTGGTTTTTT10.3401360544217687No Hit
TATTTTTTTTTTTTATAATTATTTA10.3401360544217687No Hit
TTGGTTGTGGTGTGTTGTGGTTTGT10.3401360544217687No Hit
ACAACACAAAAATAAAAAAAATTGT10.3401360544217687No Hit
TGTTGTTGTGGTGTTGGTTTTGGGG10.3401360544217687No Hit
TTTTTTTTTTTTTTTTTTTTTTTAT10.3401360544217687No Hit
CTTTTTTTTTTTTTTTTTTTTTTTT10.3401360544217687No Hit
TGGGTTGTGGTTTTGTGTGTTTGGT10.3401360544217687No Hit
TTTTTTTTTTGTTTTTTTTTGGTGT10.3401360544217687No Hit
TTTTTGGTGGTTTTGTGGGGTGTGT10.3401360544217687No Hit
TTTGGTGTGTTTTTGTGTTTTGTTC10.3401360544217687No Hit
TTTTTTTTTTTTTTGGTTTGTGGGG10.3401360544217687No Hit
GTGTTGTTGGTGGGGTTTGTTTTGG10.3401360544217687No Hit
TTGGTGTTTTTTTTGTGGTTTTGTT10.3401360544217687No Hit
TTTGTTTGGGGTTTGGTGTTTTTTG10.3401360544217687No Hit
TTTTTTTTTTTTGTTTTTTTTTTTT10.3401360544217687No Hit
TCCGGCCGCGTTTGGTGGGTTGGTG10.3401360544217687No Hit
TTTGTGGTGGTGTGTTTGTTTTTGT10.3401360544217687No Hit
TTTTTTTTTTTTTTTTTTTTGGGTT10.3401360544217687No Hit
TGTGTTGTCCTTGGTTTTGTTGGTT10.3401360544217687No Hit
TTGTTGTGTTTTTTTTTTGTTTTAT10.3401360544217687No Hit
TTTTTTTTTTTTTTTTTTTTTTATA10.3401360544217687No Hit
TGTTTTTTTTTTTGGGTTTTTTGGG10.3401360544217687No Hit
TTTTTTTTATTTATTTTTTTTTTTA10.3401360544217687No Hit
ATATAAAATTTATATTTAATTTAAA10.3401360544217687No Hit
TTGGTGGGGTTGGGGGGGGTGTTGG10.3401360544217687No Hit
TTTGTTTTTGTTTGTTTTTTTGTGT10.3401360544217687No Hit
TTTTTTTTTGTTTGGTTTTTTTTGT10.3401360544217687No Hit
TTTTTTTTTTTTTTTTTTTGTTTGT10.3401360544217687No Hit
TTTTGTTGGGGTGGTGGTTTTTGTT10.3401360544217687No Hit
TAATTTTTTTTTTTTTATTTTATTT10.3401360544217687No Hit
TTTGTTGTTTTGTGTTGGGTTGGGG10.3401360544217687No Hit
TGTTGGGGGTTGGTGGTGGGTGTTG10.3401360544217687No Hit
TTTTATTTATTTATTTTTTTTTTTT10.3401360544217687No Hit
TTTTTTTTTTGTTGTGTCTGTTGTT10.3401360544217687No Hit
TTCTGTGTGTTGTGTGTGTTTTTGT10.3401360544217687No Hit
GGGGGGGGGGGGGGGGGGGGGTGTT10.3401360544217687No Hit
TTTTGGGTGGGGGGTTTGGTGTGGT10.3401360544217687No Hit
AATAATTTTTTTTCTTTTTCTTATT10.3401360544217687No Hit
TTGGGTTTGTTTGGTGTTGTTGTTG10.3401360544217687No Hit
TGTTTTTTTTTTTTTTTTTTTTTTG10.3401360544217687No Hit
TTTTTTTTTTTTTTTTTTTTTTCGC10.3401360544217687No Hit
TTTTTTTTTTTGTTTTTTTGTTTTT10.3401360544217687No Hit
TTATTTTTTTTTTTTTTTTTTTTCT10.3401360544217687No Hit
CTGGGGGGGGGGGGGGGGGGGGGGG10.3401360544217687No Hit
TTATATTTATTTTTAACCCTAAAAA10.3401360544217687No Hit
TTGTTTTTTTTTTTTTTTGTTTGTT10.3401360544217687No Hit
AAAACATATTATTCCTCTTAAAAAA10.3401360544217687No Hit
TTTTTTTTTTTTTTTTTTTTTTAAG10.3401360544217687No Hit
TTTTTTTTTTTTTTTTTTTTTCACC10.3401360544217687No Hit
TTAGTGTTTGTGTGTGTTTTTGTTG10.3401360544217687No Hit
TTTTTTTCGGGGTTTTTTTTGTTGG10.3401360544217687No Hit
TTTTTTTTTTTGTTTTTTTTGTTTT10.3401360544217687No Hit
TTTTTGTTGGGGTGGGGGGGGGGGG10.3401360544217687No Hit
TTTTGTTTTTTTTTTTTTTGTTTTT10.3401360544217687No Hit
TTATTTTTTTTTTTTTTTTTTTTTA10.3401360544217687No Hit
TTTTTTTTGTTTGGTTGTTTTTTGT10.3401360544217687No Hit
TTTTGTTTGTTTTTGTTTTTTGTGT10.3401360544217687No Hit
TTTTTTTGTGTTTTTTTTTTTTTTT10.3401360544217687No Hit
TTGTTTTTTTTTTTTTTTTTTTGTT10.3401360544217687No Hit
TCTGGTGGTGTTTTGTCGGTTTTGG10.3401360544217687No Hit
TGTTTTTTTTTTTTTTGTTGTTTGG10.3401360544217687No Hit
TTTTTTGTTTGGTTTTTGTTTTGTT10.3401360544217687No Hit
TTTTTTGTTTTTGTTTTTTTTTTTT10.3401360544217687No Hit
TTTTTTGTTTTTGGTTGTTTTTTGG10.3401360544217687No Hit
TTTGTGTTTTTGTGTGTGTTTTTGG10.3401360544217687No Hit
TTTTTTTTTTTTTTTGTGTTTTTGT10.3401360544217687No Hit
TTTTTTTTTTTTGGTTTTTGTTGGG10.3401360544217687No Hit
TTTTTTTTTTTTTTTTTGTTTTTTT10.3401360544217687No Hit
TTGTGGTTGTGTGTGGTGTGTTGGG10.3401360544217687No Hit
TGGTGGGTTGTTGTTGGTTTTTGTG10.3401360544217687No Hit
TTTTGTGTTGTGTGGGGTGGGGGGG10.3401360544217687No Hit
TTTTTTTTTTTTTTTTGTTTTCGTT10.3401360544217687No Hit
TTTTTTGTTTTTTTTTTTGTTGGGG10.3401360544217687No Hit
TTTTCTTTTTTTTTTTTTTTTTTTT10.3401360544217687No Hit
TGTTTGGGTTTTGTGGGGTTTTTGG10.3401360544217687No Hit
TTTTTTATATTTTTTGTGTTTTTTT10.3401360544217687No Hit
TTTTTTTCTTGTTTGTGTTTGGTTT10.3401360544217687No Hit
TGTTTTTTGTTGTTTGTTGTTTTTG10.3401360544217687No Hit
TTTTTTTTATTATTTTTTGTTTTGT10.3401360544217687No Hit
TTGTGTGTTGTTGTTGGTTTTTTTG10.3401360544217687No Hit
TTTTTTGTTTTTTGTTTTTTTTTTG10.3401360544217687No Hit
AAATAATAAAAAAATATATTATTTA10.3401360544217687No Hit
ATATAATTAAATTTTTTTTATTTTT10.3401360544217687No Hit
TTTTTTTTTTTTGTTTGTTTTTTGT10.3401360544217687No Hit
GTCCTTATTATTTTTTTTTTATCTT10.3401360544217687No Hit
TTGTGGGTTGTTGGTTTTGTTTGGG10.3401360544217687No Hit
TTGTTGTGTTGTTTTGTTTGTTTGG10.3401360544217687No Hit
TTTGTTTTTTTTTTGGTGTTGTGTT10.3401360544217687No Hit
TCCTTCGTATGTGTCTCCTGCTTAG10.3401360544217687No Hit
TGTGGGTGGTGTTGTTGTGTGTTGT10.3401360544217687No Hit
TTTTTTTTTTGGTTTTTTTTGTTTT10.3401360544217687No Hit
TTTTTTTTGTCGTTGTTGTTTTGTT10.3401360544217687No Hit
GGGGTGGGGGTGTGTGGTGTGGGGG10.3401360544217687No Hit
TTTGTCGTGTGTGTGTGTTGTTTTT10.3401360544217687No Hit
TTTTTTTTGTTTTTTTTTTGTTTGT10.3401360544217687No Hit
TTGTTTTTTTTTTTTGTGTTTTTGG10.3401360544217687No Hit
TTTTTTTTTTTTTTTTTTTTTACCT10.3401360544217687No Hit
TTTGGGGGGTGGGTGGGGGTTTTGG10.3401360544217687No Hit
TCTCTCGTGTGGGGTGGGGTTTTTG10.3401360544217687No Hit
TTGTGTGGTTTGTGTTTGTTTTGGG10.3401360544217687No Hit
TTGTTTGTTTTTTGTTTGTTTTTGT10.3401360544217687No Hit
TTGTGTTTGTTGTTGGTTTTTGTGT10.3401360544217687No Hit
ATTTTATTTATTAATTTTTATTTAA10.3401360544217687No Hit
TTTGTTTTTTTTTTTTCGTTTTTTT10.3401360544217687No Hit
TTTTGTTTTGTTGTGTTGTTTTTTT10.3401360544217687No Hit
TTTTTTGTTTTTTGTGGTGTTGGGG10.3401360544217687No Hit
TTTTTTTTTGTGTTTTGTTTTTGGG10.3401360544217687No Hit
TGTTTTTTTTTTTTTTTTTGTTTGG10.3401360544217687No Hit
TTGGTGGTTTTTTGTGTTGTTTTTG10.3401360544217687No Hit
TTGTTTGCGTGTTTTTTTTGTGTTG10.3401360544217687No Hit
TTTTTTTTTTTTTTTTTTGTTTTTG10.3401360544217687No Hit
TGGGGGTGTTGTTGTGGTTTTTTGT10.3401360544217687No Hit
TTATAATTTCTACCCTTCTTATTAT10.3401360544217687No Hit
TTTTTTTTTTTTGTTTTTGTTTTTG10.3401360544217687No Hit
TTGGTGCTTTGTGCTTTTTTTTTGT10.3401360544217687No Hit
TTTTTTTTTTTTTTATTTTTTTTTT10.3401360544217687No Hit
TTTTTTTTTTTATAAAATTATTATT10.3401360544217687No Hit
TTTTTGGGGGTTTGGGGGGTTTGGG10.3401360544217687No Hit
TTTGTTTTTTTTTTTGGTTTTTTGT10.3401360544217687No Hit
TTTTTTTTGTTTTTTTTTTTTTTGT10.3401360544217687No Hit
TTTTGTTTTTTTTTTTTTTTTTAGT10.3401360544217687No Hit
TTTTTATTTATTTTTTTTAAATTTT10.3401360544217687No Hit
TTGGTGTGGTGGGGGGGGGGGGTGG10.3401360544217687No Hit
TTGGTCGTCGTTGTGTTGTTTTTTT10.3401360544217687No Hit
TCCCCAAACGCCGGCACACCCCTCA10.3401360544217687No Hit
TTTTTTTTTTTTTTTTTTTTTTGGG10.3401360544217687No Hit
TTTTTTTTGTTTTTTTTTTATTAAT10.3401360544217687No Hit
TTGTTGGGGTTTGTTTTTTTTGTGT10.3401360544217687No Hit
TTTTTTTTTTTTTTTTTTTTTTTAA10.3401360544217687No Hit
TTGGTGTTGGTTTGGTTTTTTTGGG10.3401360544217687No Hit
TTTTTGTGTGTGTTTGTTGTTTTGG10.3401360544217687No Hit
GTGGTTGTTGTTGTGTTGTTTTTGG10.3401360544217687No Hit
CAAGCACAAACTTCTTTTCATTATT10.3401360544217687No Hit
TTTTTGTGGGTTGTGTGTTTTTGTT10.3401360544217687No Hit
TTTTTTTTTTGTTTTTTTTTTTACG10.3401360544217687No Hit
TTTTTTTTTTTTTTTTTGGTTTGTT10.3401360544217687No Hit
TTTTTTTGTTGTGGTTTTTTTTTGT10.3401360544217687No Hit
TTTTTTTTTTTTTTTTTTTTAACTT10.3401360544217687No Hit
TTTTTTTTTTTTATTATTTTATATT10.3401360544217687No Hit
TTTTTGTGGTGGGGGTGGGTTGGGG10.3401360544217687No Hit
TTTGATATTTAAAAATTAAAATGCC10.3401360544217687No Hit
TTTGGGTGGTTGTGTTTGTTTTTGG10.3401360544217687No Hit
CTTTCGGGGGGGGGGGGGGGGGGGG10.3401360544217687No Hit
TTTTGTTTTTGTGTGTTTTTTTTGG10.3401360544217687No Hit
TCTTTTTTTTTTTTTTTTTTTTTGT10.3401360544217687No Hit
CCCGGGGGGGGGGGGGGGGGGGGGG10.3401360544217687No Hit
TTTGGTTTTTTGTGTGTGTTGGGGG10.3401360544217687No Hit
TTTTTTTTTTTGTTTTTTTTTTTGG10.3401360544217687No Hit
TTTTTTTTTTTTTTTTTTTTCTTTA10.3401360544217687No Hit
TTTTTTGTTTTTTTTTTTTTTTTCT10.3401360544217687No Hit
AATTTTATTTATTTTTTTTTTTTTA10.3401360544217687No Hit
TTTGTTTGTTTTTTTTTTTGTTGGT10.3401360544217687No Hit
TGTTTTTTTTTTTTTTTGTTTTTGT10.3401360544217687No Hit
TTCTATTTTTTTTTTTTTTTTTTTT10.3401360544217687No Hit
TTTTTTTGGTGTTTTTTGTTTTTTT10.3401360544217687No Hit
TTTTGTTGTTGTGTGTGTTTTTTTT10.3401360544217687No Hit
TGTTTTTTTTTTTTTTTGTTTTTGG10.3401360544217687No Hit
TGTGTTGTGTTGTGTGGGGTTTTGG10.3401360544217687No Hit
TTTGTTTTTTTTTTTTTTTTTTTTT10.3401360544217687No Hit
TTTTTTATTTAATATATTTATTTTT10.3401360544217687No Hit
TTGTTTTTTTTTTTTTTTTTTTTTT10.3401360544217687No Hit
TTGTGTTTGTTGTTTTTTTGTTGGG10.3401360544217687No Hit
TTGTGTGTGGGGTGTGTTTTTGGTT10.3401360544217687No Hit
TTTGGTGTTTTTTGTTTTTTGTTTT10.3401360544217687No Hit
TTTTGTTTTTTTTTGGTTGTTTTGG10.3401360544217687No Hit
TTTTTTTTTTTTTTTTTCTGATTTT10.3401360544217687No Hit
TTTTTTTTTTTTTGTTTTTTTTGTT10.3401360544217687No Hit
TTTTTTTGTTTTTTTGGTTTTGTTT10.3401360544217687No Hit
TTTTTTTTTTCTTTTTTTTTTTGTT10.3401360544217687No Hit
TTTTTTGTTTTTTTTTTTTTGTTTT10.3401360544217687No Hit
TTTTTTTTTGTGGGTTTTGTTTTGT10.3401360544217687No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers