H2HY7BGXC_n01_S8.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H2HY7BGXC_n01_S8.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	11376879
Sequences flagged as poor quality	0
Sequence length	50
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTCTTATACACATCTCCGAGCCCACGAGACACGTTCGAATCTCGTATGCC	131857	1.1589909675579744	No Hit
TCTCTTATACACATCTCCGAGCCCACGAGACACGTTCGAATCTCGTATGC	58930	0.5179803705392313	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	31210	0.2743283109541729	No Hit
ACAAAGGTGCTGCTTTTACAGGGAAGCTTATTCTGTTTTAAACATTGAAA	25031	0.22001640344421347	No Hit
GCCCTTGAGAAGGATTATGAGGAGGTTGGTGTGGATTCTGTTGAAGGAGA	23005	0.20220835608781634	No Hit
TCAGAAGGAAAGGAGAATGTTTTGTGGACCACTTTGGTTTTCTTTTTTGC	21690	0.19064982584415285	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACACGTTCGACTCTCGTATGCC	19580	0.17210343891325555	No Hit
CACAAAGGTGCTGCTTTTACAGGGAAGCTTATTCTGTTTTAAACATTGAA	13613	0.11965495985322512	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATGCC	24080	39.529694	44
CTACTCG	9685	36.826336	2
ATACCGC	755	36.7145	35
TACTCGG	9805	36.622154	3
GCTACTC	19930	35.890938	1
TACGTCG	105	35.617245	16
TCCGACG	945	34.91825	41
AGGCTGA	40815	34.28547	11
ACGTGCC	2095	34.1312	24
CTACTTG	10745	34.012486	2
TCTCTTA	18990	33.832417	1
AGAATCG	7750	33.811333	24
GAATCGC	7560	33.788013	25
AGAACGC	875	33.689724	15
CTCGGGA	11365	33.628494	5
CGACGGC	970	33.564724	43
GCTACTT	11150	33.546654	1
ACTCGGG	10595	33.497055	4
AATCGCT	7630	33.449196	26
TCGGGAG	12065	33.373573	6