H2HY7BGXC_n01_S7.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H2HY7BGXC_n01_S7.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	7722012
Sequences flagged as poor quality	0
Sequence length	50
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTCTTATACACATCTCCGAGCCCACGAGACCAGAACTGATCTCGTATGCC	66593	0.8623788722421049	No Hit
TCTCTTATACACATCTCCGAGCCCACGAGACCAGAACTGATCTCGTATGC	25724	0.333125615448409	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACCAGAACTGCTCTCGTATGCC	24690	0.3197353228666311	No Hit
ACAAAGGTGCTGCTTTTACAGGGAAGCTTATTCTGTTTTAAACATTGAAA	20608	0.2668734521521075	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	18190	0.23556036949955528	No Hit
TCAGAAGGAAAGGAGAATGTTTTGTGGACCACTTTGGTTTTCTTTTTTGC	17739	0.2297199227351628	No Hit
GCCCTTGAGAAGGATTATGAGGAGGTTGGTGTGGATTCTGTTGAAGGAGA	14426	0.18681659650360555	No Hit
TCTCTTATACACATCTCCGAGCCCACGAGACCAGAACTGCTCTCGTATGC	10924	0.1414657216279902	No Hit
CACAAAGGTGCTGCTTTTACAGGGAAGCTTATTCTGTTTTAAACATTGAA	10773	0.13951027271130892	No Hit
GCTGGCCCAAGGTGTCCTGCAGGCTGTAATGCAGTTTAATCAGAGTGCCA	8955	0.1159671857541791	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATGCC	15815	0.0	39.169556	44
ATACCGC	605	0.0	37.45446	35
GTCGAAT	770	0.0	37.427032	10
CGTACTA	560	0.0	36.139736	42
CTACTCG	4160	0.0	36.073536	2
TACTCGG	4175	0.0	35.468906	3
TATACCG	660	0.0	35.333256	34
CGCGTCG	25	0.002352779	35.20243	26
TCCGACG	575	0.0	35.19696	41
GGTCGAA	835	0.0	34.777466	9
GCTACTC	8760	0.0	34.714653	1
TACCGCA	680	0.0	33.970516	36
GCCGTAA	1630	0.0	33.87437	40
CCGTAAC	1190	0.0	33.82901	41
ACGTGCC	1310	0.0	33.758057	24
TGGTCGA	870	0.0	33.63102	8
CGTAACC	1225	0.0	33.580772	42
TGCCGTA	1640	0.0	33.26822	39
AGGCTGA	17870	0.0	33.078667	11
GAATCGC	3270	0.0	33.03592	25