H2HY7BGXC_n01_S6.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H2HY7BGXC_n01_S6.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	9197964
Sequences flagged as poor quality	0
Sequence length	50
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTGGACCTGCGGCCTAAGAAGACACGTGCCATGCGCCGCCGGCTCAACAA	32071	0.3486749893780841	No Hit
TCAGAAGGAAAGGAGAATGTTTTGTGGACCACTTTGGTTTTCTTTTTTGC	26189	0.28472605459208145	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACAACCAGGTATCTCGTATGCC	23395	0.2543497669701686	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	21275	0.23130118795855256	No Hit
GCCAATAGGCAGCTTTCTTAACTATCCTAACAAGCCTTGGACCAAATGGA	19209	0.2088396953934588	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACAACCAGGTATCTCGTATGGC	16979	0.18459519954633438	No Hit
GCTGGAGCTGGCAAGGTCACCAAGTCTGCCCAGAAAGCTCAGAAGGCTAA	16796	0.1826056288108977	No Hit
GCCTTCGGAGCGTTCTCTGTCCTACTTCTGACTTTACTTGTGGTGTGACC	16272	0.17690871588538506	No Hit
TCTCTTATACACATCTCCGAGCCCACGAGACAACCAGGTATCTCGTATGC	11023	0.11984173888917155	No Hit
CAGAAGGAAAGGAGAATGTTTTGTGGACCACTTTGGTTTTCTTTTTTGCG	10465	0.11377517894177451	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GACACGT	4945	39.81963	21
ACGTGCC	4985	39.235306	24
AGACACG	5150	38.789936	20
CACGTGC	5085	38.463715	23
CGGCCTA	5235	38.36732	10
ACACGTG	5135	38.303417	22
TCGGAGC	2235	38.19915	5
GCGTTCT	2250	38.13199	10
CGTTCTC	2300	37.68563	11
ATGCGCC	4730	37.578846	31
CGGAGCG	2300	37.50269	6
ATACCGC	1205	37.426884	35
GAGCGTT	2315	37.156357	8
TATACCG	1205	37.06174	34
ACCTGCG	5585	36.16754	5
TGCGGCC	5780	35.967594	8
GCGGCCT	5915	35.556	9
GCGCCGC	4620	35.428097	33
CGCCGGC	4925	35.244194	37
CGCCGCC	4635	35.12358	34