H2HY7BGXC_n01_S2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H2HY7BGXC_n01_S2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	8193903
Sequences flagged as poor quality	0
Sequence length	50
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTCTTATACACATCTCCGAGCCCACGAGACTTCCATCCATCTCGTATGCC	22660	0.2765470862908677	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	19739	0.24089862913925147	No Hit
GCCTTCGGAGCGTTCTCTGTCCTACTTCTGACTTTACTTGTGGTGTGACC	19037	0.23233128339449466	No Hit
CTGGACCTGCGGCCTAAGAAGACACGTGCCATGCGCCGCCGGCTCAACAA	18970	0.23151360224791534	No Hit
TCAGAAGGAAAGGAGAATGTTTTGTGGACCACTTTGGTTTTCTTTTTTGC	17490	0.21345139184586392	No Hit
GCTGGAGCTGGCAAGGTCACCAAGTCTGCCCAGAAAGCTCAGAAGGCTAA	13588	0.16583061820477982	No Hit
GCCAATAGGCAGCTTTCTTAACTATCCTAACAAGCCTTGGACCAAATGGA	12244	0.14942817848832235	No Hit
TCTCTTATACACATCTCCGAGCCCACGAGACTTCCATCCATCTCGTATGC	9186	0.11210774645489457	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGGAGCG	2705	39.451344	6
CGGCCTA	3440	39.33125	10
GACACGT	3340	39.127033	21
TCGGAGC	2750	39.12582	5
AGACACG	3420	38.40524	20
GCGTTCT	2780	37.985466	10
GAGCGTT	2830	37.858517	8
CGTTCTC	2820	37.758263	11
ATGCGCC	3010	37.492588	31
ACACGTG	3525	36.94873	22
ACGTGCC	3505	36.72018	24
ATACCGC	785	36.15229	35
TATACCG	790	35.923477	34
CACGTGC	3595	35.7397	23
TCCGACG	1330	35.396202	41
GTCCTAC	2980	35.360558	19
GCGGCCT	4220	35.18944	9
CGCCGGC	3215	34.898354	37
ACCTGCG	3925	34.812824	5
GCGCCGC	3005	34.6284	33