H2HY7BGXC_n01_S22.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H2HY7BGXC_n01_S22.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	7327925
Sequences flagged as poor quality	0
Sequence length	50
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	21666	0.29566350638141087	No Hit
GCCCTTGAGAAGGATTATGAGGAGGTTGGTGTGGATTCTGTTGAAGGAGA	21358	0.2914604065953186	No Hit
TCAGAAGGAAAGGAGAATGTTTTGTGGACCACTTTGGTTTTCTTTTTTGC	15000	0.204696418153843	No Hit
ACAAAGGTGCTGCTTTTACAGGGAAGCTTATTCTGTTTTAAACATTGAAA	11250	0.15352231361538224	No Hit
GCTGGAGCTGGCAAGGTCACCAAGTCTGCCCAGAAAGCTCAGAAGGCTAA	10024	0.13679179303827482	No Hit
GCCTTCGGAGCGTTCTCTGTCCTACTTCTGACTTTACTTGTGGTGTGACC	9513	0.12981846839316724	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACGAACGGTAATCTCGTATGCC	9422	0.12857664345636727	No Hit
GGCAGTGGAAGGAAAGAAGCATGGTCTACTTTAGGTGTGCGCTGGGTCTC	9137	0.12468741151144423	No Hit
CACAAAGGTGCTGCTTTTACAGGGAAGCTTATTCTGTTTTAAACATTGAA	8897	0.12141226882098274	No Hit
GGATTATGAGGAGGTTGGTGTGGATTCTGTTGAAGGAGAGGGTGAGGAAG	8018	0.10941705871716755	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GAGCGTT	1545	36.452087	8
GCGTTCT	1495	36.346592	10
CGTTCTC	1505	36.10484	11
CCTTCGG	1600	35.20529	2
CGGAGCG	1575	35.06535	6
TCGGAGC	1595	34.76361	5
GCACTTT	14615	34.371227	1
GACACGT	1140	33.96631	21
ATACCGC	510	33.215237	35
GCTACGC	460	33.004963	1
TATACCG	540	32.999554	34
TACTCGG	7775	32.997433	3
GCTACTT	9345	32.822483	1
TACCCTA	2265	32.731335	17
CTACTTG	9105	32.62434	2
CGCCGGC	1040	32.576042	37
CTACTCG	7820	32.526627	2
GCGACGT	230	32.520412	13
AGGCCGA	7150	32.490986	11
GCTACTC	15755	32.4568	1