H2HY7BGXC_n01_S21.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H2HY7BGXC_n01_S21.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	7097874
Sequences flagged as poor quality	0
Sequence length	50
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCCCTTGAGAAGGATTATGAGGAGGTTGGTGTGGATTCTGTTGAAGGAGA	21413	0.3016818838993197	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	20563	0.28970646703505865	No Hit
TCAGAAGGAAAGGAGAATGTTTTGTGGACCACTTTGGTTTTCTTTTTTGC	15097	0.21269749223499884	No Hit
ACAAAGGTGCTGCTTTTACAGGGAAGCTTATTCTGTTTTAAACATTGAAA	12212	0.17205151852512457	No Hit
CACAAAGGTGCTGCTTTTACAGGGAAGCTTATTCTGTTTTAAACATTGAA	9871	0.1390698116083774	No Hit
GGCAGTGGAAGGAAAGAAGCATGGTCTACTTTAGGTGTGCGCTGGGTCTC	8891	0.1252628604001705	No Hit
GCTGGCCCAAGGTGTCCTGCAGGCTGTAATGCAGTTTAATCAGAGTGCCA	8335	0.11742952889837154	No Hit
GCCTTCGGAGCGTTCTCTGTCCTACTTCTGACTTTACTTGTGGTGTGACC	8185	0.11531622003997254	No Hit
CAGAAGGAAAGGAGAATGTTTTGTGGACCACTTTGGTTTTCTTTTTTGCG	8082	0.11386508129053856	No Hit
GGATTATGAGGAGGTTGGTGTGGATTCTGTTGAAGGAGAGGGTGAGGAAG	7728	0.10887767238471689	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TATACCG	585	0.0	39.11064	34
TCGGAGC	1330	0.0	38.38197	5
GCGTTCT	1365	0.0	37.068108	10
CGGAGCG	1345	0.0	36.808754	6
GAGCGTT	1335	0.0	36.418526	8
ATACCGC	630	0.0	36.317028	35
CGTTCTC	1390	0.0	35.926865	11
CGGTACG	50	5.9517333E-8	35.200817	21
GCACTTT	13505	0.0	34.11693	1
TACCCTA	2455	0.0	33.872364	17
CCGTAAC	565	0.0	33.484913	41
TGCCGTA	760	0.0	33.289307	39
CCTTCGG	1530	0.0	33.220203	2
GTCGAAT	745	0.0	33.0725	10
CGTTACG	60	8.021743E-9	32.999607	34
AGCGTTC	1520	0.0	32.854404	9
TTCGGAG	1575	0.0	32.550686	4
GACACGT	1005	0.0	32.39876	21
GGTCTAC	1935	0.0	32.290157	23
TTTGGGA	17360	0.0	32.105274	5