H2HY7BGXC_n01_S1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H2HY7BGXC_n01_S1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	8389636
Sequences flagged as poor quality	0
Sequence length	50
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTCTTATACACATCTCCGAGCCCACGAGACCTCTGGTAATCTCGTATGCC	35244	0.4200897392926225	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	24433	0.29122836795303153	No Hit
CTGGACCTGCGGCCTAAGAAGACACGTGCCATGCGCCGCCGGCTCAACAA	20531	0.24471860280946633	No Hit
TCAGAAGGAAAGGAGAATGTTTTGTGGACCACTTTGGTTTTCTTTTTTGC	18883	0.22507531911992368	No Hit
GCCAATAGGCAGCTTTCTTAACTATCCTAACAAGCCTTGGACCAAATGGA	16780	0.200008677372892	No Hit
TCTCTTATACACATCTCCGAGCCCACGAGACCTCTGGTAATCTCGTATGC	14084	0.16787379094873725	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACCTCTGGTACTCTCGTATGCC	12960	0.1544763086265006	No Hit
GCCTTCGGAGCGTTCTCTGTCCTACTTCTGACTTTACTTGTGGTGTGACC	10271	0.12242485848015336	No Hit
AGCAATATCAACCATTAACCTTCCCTCTACACTTATCATCTTCACAATTC	9265	0.11043387341238642	No Hit
CCCTCTACACTTATCATCTTCACAATTCTAATTCTACTGACTATCCTAGA	9050	0.10787118773686963	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCGTTCT	1585	38.168983	10
CGGCCTA	3100	37.89542	10
GACACGT	2960	37.758785	21
GAGCGTT	1630	36.845306	8
AGACACG	3090	36.526234	20
TCCGACG	1305	36.2424	41
ACGTGCC	3090	35.95641	24
GTATGCC	8320	35.80011	44
GCGACGT	745	35.730053	13
ACACGTG	3110	35.725388	22
TATACCG	945	35.618412	34
ATACCGC	950	35.430946	35
ATGCGCC	3060	35.36981	31
GTCGAAT	1120	35.355877	10
TCGGAGC	1720	35.30906	5
CGGAGCG	1755	35.23179	6
CTACTCG	7510	34.80824	2
CGACGGC	1360	34.614964	43
TACTCGG	7600	34.511436	3
CACGTGC	3215	34.490185	23