H2HY7BGXC_n01_S17.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H2HY7BGXC_n01_S17.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	7553238
Sequences flagged as poor quality	0
Sequence length	50
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCCAATAGGCAGCTTTCTTAACTATCCTAACAAGCCTTGGACCAAATGGA	53719	0.7112049163550784	No Hit
TCAGAAGGAAAGGAGAATGTTTTGTGGACCACTTTGGTTTTCTTTTTTGC	39119	0.5179103319662376	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	21840	0.2891475152775538	No Hit
CTGGACCTGCGGCCTAAGAAGACACGTGCCATGCGCCGCCGGCTCAACAA	21332	0.2824219228892298	No Hit
CAGAAGGAAAGGAGAATGTTTTGTGGACCACTTTGGTTTTCTTTTTTGCG	18742	0.24813199319285317	No Hit
GCAGGAAGGGGGGTCGCCGTGGTCGCCGTCTGTGAACAAGATTCCTCAAA	18456	0.24434553763564715	No Hit
GCAAAGAGGAGGCCATGCGCTGGTTCCAGCAGAAGTATGATGGGATCATC	13366	0.17695722020145532	No Hit
GCTGGAGCTGGCAAGGTCACCAAGTCTGCCCAGAAAGCTCAGAAGGCTAA	12228	0.16189083410320182	No Hit
GCCTTCGGAGCGTTCTCTGTCCTACTTCTGACTTTACTTGTGGTGTGACC	11066	0.1465067034826653	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACGTCTACCAATCTCGTATGCC	10192	0.13493550712952512	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AGACACG	3550	39.911137	20
CGGCCTA	3765	39.265854	10
AATAGGC	7800	39.183884	4
CGGAGCG	1730	39.175373	6
CAATAGG	7995	39.026062	3
ATGCGCC	3270	38.884235	31
ACGTGCC	3600	38.8068	24
CGCCGCC	3060	38.75108	34
ATACCGC	1085	38.72756	35
CGCCGGC	3285	38.50782	37
TCCTAAC	7875	38.49774	25
GACACGT	3690	38.218025	21
GCGCCGC	3120	38.217403	33
ATAGGCA	8070	38.091534	5
CACGTGC	3685	37.971363	23
CGCAACG	145	37.93225	20
CCAATAG	8210	37.843258	2
ACCTGCG	3885	37.834766	5
CGCCGTC	2935	37.704784	24
ACTCGAC	305	37.509396	22