H2HY7BGXC_n01_S14.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H2HY7BGXC_n01_S14.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	7775055
Sequences flagged as poor quality	0
Sequence length	50
%GC	40

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCCAATAGGCAGCTTTCTTAACTATCCTAACAAGCCTTGGACCAAATGGA	47919	0.6163171836083474	No Hit
TCAGAAGGAAAGGAGAATGTTTTGTGGACCACTTTGGTTTTCTTTTTTGC	41768	0.5372052030500105	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACTTCCATCCATCTCGTATGCC	33220	0.427263858583637	No Hit
CAGAAGGAAAGGAGAATGTTTTGTGGACCACTTTGGTTTTCTTTTTTGCG	21040	0.27060901819987127	No Hit
GCAGGAAGGGGGGTCGCCGTGGTCGCCGTCTGTGAACAAGATTCCTCAAA	19485	0.25060915967797015	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	18634	0.23966389948366926	No Hit
GCCTGGGGCTCCCTCTCTGGTTTCCTATTTGCAGTTACTTGAATAAAAAA	18080	0.23253854795882473	No Hit
TCTCTTATACACATCTCCGAGCCCACGAGACTTCCATCCATCTCGTATGC	17968	0.2310980436794338	No Hit
CTGGACCTGCGGCCTAAGAAGACACGTGCCATGCGCCGCCGGCTCAACAA	13304	0.17111132975908208	No Hit
GCAAAGAGGAGGCCATGCGCTGGTTCCAGCAGAAGTATGATGGGATCATC	11654	0.14988961492876898	No Hit
GCTGGATTGCAGAGTTAAGTTTATGATTATGAAATAAAAACTAAATAACA	10672	0.13725947919339476	No Hit
GAGAATGAAGGAGGCTAAGGAGAAGCGCCAGGAACAAATTGCGAAGAGAC	8668	0.11148474190857814	No Hit
GCTCACGGGCAAGGATGTTAATTTTGAATTCCCAGAGTTTCAATTGTAAA	8627	0.11095741444915824	No Hit
CCGGAACTGGTCGAATGAGGCACCTAAAAATTGTATACCGCAGATTCAGG	8160	0.10495102606991205	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ATACCGC	1135	40.89732	35
CGCAACG	220	40.001503	20
ACGTGCC	2150	39.396572	24
AGACACG	2210	39.223194	20
GACACGT	2210	38.824738	21
CGCATAC	375	38.718716	35
TATACCG	1190	38.637375	34
ATGCGCC	2000	38.49773	31
CGCCGTC	2970	38.149338	24
CGCCGCC	1835	38.124073	34
TACCGAT	395	37.874355	25
GTATGCC	5705	37.557823	44
ACACGTG	2285	37.550404	22
CGGAGCG	1140	37.446022	6
CAATAGG	7540	37.412292	3
CGAATGA	1460	37.36814	12
CACGGGC	1540	37.14927	4
ACCTGCG	2395	37.025894	5
TCCTAAC	6970	36.962173	25
GCGCCGC	1915	36.876057	33