H2HY7BGXC_n01_S12.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H2HY7BGXC_n01_S12.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	8730021
Sequences flagged as poor quality	0
Sequence length	50
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTCTTATACACATCTCCGAGCCCACGAGACTTAGCCTCATCTCGTATGCC	41926	0.48025084933930856	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	22703	0.26005664820279356	No Hit
TCTCTTATACACATCTCCGAGCCCACGAGACTTAGCCTCATCTCGTATGC	17784	0.2037108501800855	No Hit
GCCCTTGAGAAGGATTATGAGGAGGTTGGTGTGGATTCTGTTGAAGGAGA	14697	0.168350110498016	No Hit
TCAGAAGGAAAGGAGAATGTTTTGTGGACCACTTTGGTTTTCTTTTTTGC	12602	0.14435245917506956	No Hit
CTGGACCTGCGGCCTAAGAAGACACGTGCCATGCGCCGCCGGCTCAACAA	11034	0.1263914485429073	No Hit
ACAAAGGTGCTGCTTTTACAGGGAAGCTTATTCTGTTTTAAACATTGAAA	10526	0.1205724476493241	No Hit
CCTACAAGCCTCAGAGTACTTCGAGTCTCCCTTCACCATTTCCGACGGCA	9057	0.10374545490784041	No Hit
GCCTTCGGAGCGTTCTCTGTCCTACTTCTGACTTTACTTGTGGTGTGACC	8888	0.10180960618536887	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ATACCGC	685	38.218292	35
GTATGCC	6705	36.77895	44
TCCGACG	1325	35.363377	41
GACACGT	1990	34.604374	21
CTACTCG	7140	34.422073	2
TATACCG	755	34.383488	34
AGACACG	2040	34.295467	20
AGAATCG	6005	34.292576	24
ACGTGCC	2045	34.103836	24
CGCCGAT	685	34.0426	7
TACTCGG	7235	34.030716	3
GAATCGC	5865	33.948284	25
GCTACTC	15365	33.795895	1
CTACTTG	8405	33.717873	2
GAGCGTT	1415	33.427345	8
AATCGCT	6045	33.410553	26
GCTACTT	8795	33.373714	1
AGGCTGA	33795	33.291477	11
GCGTTCT	1415	33.116394	10
CGGCCTA	2230	32.851803	10