H2HY7BGXC_n01_Lu_RNAseq_Aug2019_Sample_26.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H2HY7BGXC_n01_Lu_RNAseq_Aug2019_Sample_26.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1205
Sequences flagged as poor quality	0
Sequence length	50
%GC	45

Per base sequence quality

Per base quality graph

Per tile sequence quality

Per base quality graph

Per sequence quality scores

Per Sequence quality graph

Per base sequence content

Per sequence GC content

Per sequence GC content graph

Per base N content

N content graph

Sequence Length Distribution

Sequence length distribution

Sequence Duplication Levels

Duplication level graph

Overrepresented sequences

Sequence	Count	Percentage	Possible Source
CTCTTATACACATCTCCGAGCCCACGAGACGCCTCAATATCTCGTATGCC	23	1.9087136929460582	No Hit
CTCTTATACACATCTCCGAGCCCTCGAGACGCCTCAATATCTCGTATGCC	6	0.49792531120331945	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	6	0.49792531120331945	No Hit
GCCAATAGGCAGCTTTCTTAACTATCCTAACAAGCCTTGGACCAAATGGA	5	0.4149377593360996	No Hit
TCTGCTGAGGGGGCAGGCGGAGCTTGAGGAAACCGCAGATAAGTTTTTTT	5	0.4149377593360996	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACGCCTCACTATCTCGTATGCC	4	0.33195020746887965	No Hit
CCTTCCTGGGGGCCTTGGCTTTGATCTACAATGAAGCCCTCAAGGGCTGA	3	0.24896265560165973	No Hit
GCGTAAAGAGTGTTTTAGATCACCCCCTCCCCAATAAAGCTAAAACTCAC	3	0.24896265560165973	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACGCCTCAATCTCTCGTATGCC	3	0.24896265560165973	No Hit
GCTCTAGGAGGGCTGGCAACTTAGAGGTGGGGAGCAGAGAATTCTCTTAT	3	0.24896265560165973	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACCTCTGGTAATCTCGTATGCC	3	0.24896265560165973	No Hit
CTGCAGAGAGATACTAAGCAGCAAAATCTTGGTGTTGTGATGTACAGAAA	2	0.16597510373443983	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACGCCTCAATATCTCGTCTGCC	2	0.16597510373443983	No Hit
TCTGTGAGTAGCCATGTGTGTTGATCAGATACAGTTTTTCTGAGATCTTC	2	0.16597510373443983	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACCTCTGGTAATCTCGTAAGCC	2	0.16597510373443983	No Hit
CTCTTGTACACATCTCCGAGCCCACGAGACGCCTCAATATCTCGTATGCC	2	0.16597510373443983	No Hit
GCTATGGTGGGCAAACTAAGCCGATTTTCCGGAAAAAGGCTAAAACTACA	2	0.16597510373443983	No Hit
ATCTGAAAGAGGTTATTCGGGAAAGAAAAGAAAGAGAAGAATGGGCAAAG	2	0.16597510373443983	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACCTCTGGTAAGCTCGTATGCC	2	0.16597510373443983	No Hit
CCGGAACTGGTCGAATGAGGCACCTAAAAATTGTATACCGCAGATTCAGG	2	0.16597510373443983	No Hit
CCTTTATTGAAATGTTTTCCTTTGTGCTTAACTGGCTGGGCATTCCACAG	2	0.16597510373443983	No Hit
CCTCTGGGGGTCCTCTCTGAGTCAAATCCAGTGGTGGGTAATTGTACAAT	2	0.16597510373443983	No Hit
CTCCCTTGGGCTCTGATGAAAAATTGCTGACTGTAGCTTTGGAAGTTTAG	2	0.16597510373443983	No Hit
GACACCAGGAAGGTGAGATCTTCGACACAGAAAAAGAGAAATATGAGATT	2	0.16597510373443983	No Hit
GCTTTCAAGTGCCTTTCTGCAGTTTTTCAGGAGCGCAAGATAGATTTGGA	2	0.16597510373443983	No Hit
CTGGACCTGCGGCCTAAGAAGACACGTGCCATGCGCCTCCGGCTCAACAA	2	0.16597510373443983	No Hit
CTCTTATACACATCTCCGAGCCGACGAGACGCCTCAATATCTCGTATGCC	2	0.16597510373443983	No Hit
CTCCTATACACATCTCCGAGCCCACGAGACGCCTCAATATCTCGTATGCC	2	0.16597510373443983	No Hit
CCCAGAGGAGCCACCAGTTCTCATGGGTGGCACTCAGTCTCTCTTCTCTC	2	0.16597510373443983	No Hit
GCCCCTGGGCCGCTAGAAGGGAGCCAAGCTGACTCCTGAGGAAGAAGAGA	2	0.16597510373443983	No Hit
CCCCACTGGGACGGAATAAATGCTCTGCAGACCTGGAAAAAAAAAAAAAA	2	0.16597510373443983	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACATCTGGTAATCTCGTATGCC	2	0.16597510373443983	No Hit
GCCATAACATCTTTTGCCACGTATAGCTGGAATTAAGTGTTGTCTTGGAG	2	0.16597510373443983	No Hit
GGCATTGGGGTTGGTGACTCTGATGCCAGGCTGCGCAGTGAAGAAAATGA	2	0.16597510373443983	No Hit
TCAGAAGGAAAGGAGAATGTTTTGTGGACCACTTTGGTTTTCTTTTTTGC	2	0.16597510373443983	No Hit
CTCTTATACTCATCTCCGAGCCCACGAGACGCCTCAATATCTCGTATGCC	2	0.16597510373443983	No Hit
GCTGTAGATGAATGTTCTTAGCTGTCATGTTTAAAAATACTTCTGCTTCG	2	0.16597510373443983	No Hit
GATGGCAGCCGGCTCATAAAGGTTCATTTGGACAAAGCACAGCAGAACAA	2	0.16597510373443983	No Hit
CTCAGAACTGTTTGTTTCAATTGGCCATTTAAGTTTAGTAGTAAAAGACT	2	0.16597510373443983	No Hit
GTGAATGGGGGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	2	0.16597510373443983	No Hit
GTTCAATTGGAGAATTTTAATGTTTTTCATTTATCATTGTAAAACCAAGG	2	0.16597510373443983	No Hit
TATACACATCTCCGAGCCCACGAGACGCCTCAATATCTCGTATGCCGTCT	2	0.16597510373443983	RNA PCR Primer, Index 6 (95% over 21bp)
CCCATAGAGGGCTGCGTCACTTCTGGGGCCTTCGTGTCCGAGGCCAGCAC	2	0.16597510373443983	No Hit

Adapter Content

Adapter graph

Kmer Content

No overrepresented Kmers

Summary