[2021-08-03 07:23:51,792] multiqc [DEBUG ] No MultiQC config found: /share/apps/multiqc/1.9/lib/python3.8/site-packages/multiqc_config.yaml [2021-08-03 07:23:51,793] multiqc [DEBUG ] No MultiQC config found: /home/gencore/.multiqc_config.yaml [2021-08-03 07:23:51,793] multiqc [DEBUG ] No MultiQC config found: multiqc_config.yaml [2021-08-03 07:23:51,793] multiqc [DEBUG ] Loading config settings from: /home/gencore/SCRIPTS/hpcpipe/mqc_config.yaml [2021-08-03 07:23:51,793] multiqc [DEBUG ] New config 'report_section_order': {'demux_report': {'after': 'run_stats'}} [2021-08-03 07:23:51,794] multiqc [DEBUG ] Command used: /share/apps/multiqc/1.9/bin/multiqc -f -c /home/gencore/SCRIPTS/hpcpipe/mqc_config.yaml /scratch/gencore/logs/html/H2HY5AFX3/merged [2021-08-03 07:23:53,064] multiqc [WARNING] MultiQC Version v1.11 now available! [2021-08-03 07:23:53,064] multiqc [INFO ] This is MultiQC v1.9 [2021-08-03 07:23:53,064] multiqc [DEBUG ] Command : /share/apps/multiqc/1.9/bin/multiqc -f -c /home/gencore/SCRIPTS/hpcpipe/mqc_config.yaml /scratch/gencore/logs/html/H2HY5AFX3/merged [2021-08-03 07:23:53,064] multiqc [DEBUG ] Working dir : /scratch/gencore/logs/html/H2HY5AFX3/merged [2021-08-03 07:23:53,064] multiqc [INFO ] Template : default [2021-08-03 07:23:53,064] multiqc [DEBUG ] Running Python 3.8.6 (default, Oct 11 2020, 20:34:31) [GCC Intel(R) C++ gcc 8.3.1 mode] [2021-08-03 07:23:53,064] multiqc [INFO ] Searching : /scratch/gencore/logs/html/H2HY5AFX3/merged [2021-08-03 07:23:53,065] multiqc [DEBUG ] Analysing modules: custom_content, conpair, peddy, somalier, methylQA, mosdepth, phantompeakqualtools, qualimap, preseq, quast, qorts, rna_seqc, rockhopper, rsem, rseqc, busco, goleft_indexcov, disambiguate, supernova, deeptools, sargasso, verifybamid, mirtrace, happy, mirtop, homer, macs2, theta2, snpeff, gatk, htseq, bcftools, featureCounts, fgbio, dragen, dedup, damageprofiler, biobambam2, mtnucratio, picard, prokka, samblaster, samtools, sexdeterrmine, bamtools, jellyfish, vcftools, longranger, stacks, varscan2, bbmap, bismark, biscuit, hicexplorer, hicup, hicpro, salmon, kallisto, slamdunk, star, hisat2, tophat, bowtie2, bowtie1, snpsplit, kat, leehom, adapterRemoval, clipandmerge, cutadapt, flexbar, kaiju, kraken, malt, trimmomatic, sickle, skewer, sortmerna, biobloomtools, fastq_screen, afterqc, fastp, fastqc, pycoqc, minionqc, multivcfanalyzer, clusterflow, bcl2fastq, interop, ivar, flash, seqyclean [2021-08-03 07:23:53,065] multiqc [DEBUG ] Using temporary directory for creating report: /state/partition1/job-9133098/tmpg0bkrzdv [2021-08-03 07:23:53,164] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H2HY5AFX3_n01_undetermined_fastqc.html [2021-08-03 07:23:53,167] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded 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[2021-08-03 07:23:53,256] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: undetermined_barcodes.txt [2021-08-03 07:23:53,256] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: undetermined_barcodes.txt [2021-08-03 07:23:53,256] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: undetermined_barcodes.txt [2021-08-03 07:23:53,316] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: undetermined_barcodes.txt [2021-08-03 07:23:55,956] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H2HY5AFX3_n02_SOR_D_3_fastqc.html [2021-08-03 07:23:55,959] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H2HY5AFX3_n02_SOR_D_3_fastqc.html [2021-08-03 07:23:56,003] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H2HY5AFX3_n02_undetermined_fastqc.html [2021-08-03 07:23:56,005] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H2HY5AFX3_n02_undetermined_fastqc.html [2021-08-03 07:23:56,047] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H2HY5AFX3_n01_SC_D_9_fastqc.html [2021-08-03 07:23:56,049] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H2HY5AFX3_n01_SC_D_9_fastqc.html [2021-08-03 07:23:56,092] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H2HY5AFX3_n01_SC_R_9_fastqc.html [2021-08-03 07:23:56,094] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H2HY5AFX3_n01_SC_R_9_fastqc.html [2021-08-03 07:23:56,139] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H2HY5AFX3_n02_SC_D_3_fastqc.html [2021-08-03 07:23:56,141] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H2HY5AFX3_n02_SC_D_3_fastqc.html [2021-08-03 07:23:56,198] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H2HY5AFX3_n01_SC_D_3_fastqc.html [2021-08-03 07:23:56,200] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H2HY5AFX3_n01_SC_D_3_fastqc.html [2021-08-03 07:23:56,245] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H2HY5AFX3_n02_SC_R_0_fastqc.html [2021-08-03 07:23:56,246] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H2HY5AFX3_n02_SC_R_0_fastqc.html [2021-08-03 07:23:56,291] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H2HY5AFX3_n01_SC_R_3_fastqc.html [2021-08-03 07:23:56,292] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H2HY5AFX3_n01_SC_R_3_fastqc.html [2021-08-03 07:23:56,338] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H2HY5AFX3_n02_SC_D_9_fastqc.html [2021-08-03 07:23:56,340] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H2HY5AFX3_n02_SC_D_9_fastqc.html [2021-08-03 07:23:56,384] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H2HY5AFX3_n02_SOR_R_3_fastqc.html [2021-08-03 07:23:56,385] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H2HY5AFX3_n02_SOR_R_3_fastqc.html [2021-08-03 07:23:56,439] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H2HY5AFX3_n02_SOR_D_0_fastqc.html [2021-08-03 07:23:56,441] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H2HY5AFX3_n02_SOR_D_0_fastqc.html [2021-08-03 07:23:56,485] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H2HY5AFX3_n02_SC_R_9_fastqc.html [2021-08-03 07:23:56,487] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H2HY5AFX3_n02_SC_R_9_fastqc.html [2021-08-03 07:23:56,531] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H2HY5AFX3_n01_SOR_R_3_fastqc.html [2021-08-03 07:23:56,532] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H2HY5AFX3_n01_SOR_R_3_fastqc.html [2021-08-03 07:23:56,588] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H2HY5AFX3_n02_SOR_R_0_fastqc.html [2021-08-03 07:23:56,590] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H2HY5AFX3_n02_SOR_R_0_fastqc.html [2021-08-03 07:23:56,635] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H2HY5AFX3_n01_SOR_R_6_fastqc.html [2021-08-03 07:23:56,636] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H2HY5AFX3_n01_SOR_R_6_fastqc.html [2021-08-03 07:23:56,680] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H2HY5AFX3_n01_SC_R_0_fastqc.html [2021-08-03 07:23:56,682] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H2HY5AFX3_n01_SC_R_0_fastqc.html [2021-08-03 07:23:56,728] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H2HY5AFX3_n02_SOR_R_6_fastqc.html [2021-08-03 07:23:56,729] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H2HY5AFX3_n02_SOR_R_6_fastqc.html [2021-08-03 07:23:56,774] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H2HY5AFX3_n01_SOR_R_9_fastqc.html [2021-08-03 07:23:56,776] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H2HY5AFX3_n01_SOR_R_9_fastqc.html [2021-08-03 07:23:56,832] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H2HY5AFX3_n01_SOR_R_0_fastqc.html [2021-08-03 07:23:56,834] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H2HY5AFX3_n01_SOR_R_0_fastqc.html [2021-08-03 07:23:56,898] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H2HY5AFX3_n01_SOR_D_0_fastqc.html [2021-08-03 07:23:56,900] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H2HY5AFX3_n01_SOR_D_0_fastqc.html [2021-08-03 07:23:56,944] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H2HY5AFX3_n02_SOR_D_6_fastqc.html [2021-08-03 07:23:56,946] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H2HY5AFX3_n02_SOR_D_6_fastqc.html [2021-08-03 07:23:56,989] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H2HY5AFX3_n02_SOR_D_9_fastqc.html [2021-08-03 07:23:56,991] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H2HY5AFX3_n02_SOR_D_9_fastqc.html [2021-08-03 07:23:57,037] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H2HY5AFX3_n02_SC_R_6_fastqc.html [2021-08-03 07:23:57,039] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H2HY5AFX3_n02_SC_R_6_fastqc.html [2021-08-03 07:23:57,102] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H2HY5AFX3_n01_SOR_D_3_fastqc.html [2021-08-03 07:23:57,103] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H2HY5AFX3_n01_SOR_D_3_fastqc.html [2021-08-03 07:23:57,161] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H2HY5AFX3_n02_SC_D_6_fastqc.html [2021-08-03 07:23:57,162] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H2HY5AFX3_n02_SC_D_6_fastqc.html [2021-08-03 07:23:57,215] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H2HY5AFX3_n01_SC_D_0_fastqc.html [2021-08-03 07:23:57,216] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H2HY5AFX3_n01_SC_D_0_fastqc.html [2021-08-03 07:23:57,262] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H2HY5AFX3_n02_SC_D_0_fastqc.html [2021-08-03 07:23:57,264] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H2HY5AFX3_n02_SC_D_0_fastqc.html [2021-08-03 07:23:57,308] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H2HY5AFX3_n01_SC_D_6_fastqc.html [2021-08-03 07:23:57,309] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H2HY5AFX3_n01_SC_D_6_fastqc.html [2021-08-03 07:23:57,353] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H2HY5AFX3_n01_SC_R_6_fastqc.html [2021-08-03 07:23:57,355] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H2HY5AFX3_n01_SC_R_6_fastqc.html [2021-08-03 07:23:57,399] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H2HY5AFX3_n02_SC_R_3_fastqc.html [2021-08-03 07:23:57,401] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H2HY5AFX3_n02_SC_R_3_fastqc.html [2021-08-03 07:23:57,445] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H2HY5AFX3_n01_SOR_D_6_fastqc.html [2021-08-03 07:23:57,446] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H2HY5AFX3_n01_SOR_D_6_fastqc.html [2021-08-03 07:23:57,491] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: H2HY5AFX3_n01_SOR_D_9_fastqc.html [2021-08-03 07:23:57,493] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: H2HY5AFX3_n01_SOR_D_9_fastqc.html [2021-08-03 07:23:58,007] multiqc.plots.bargraph [DEBUG ] Using matplotlib version 3.3.2 [2021-08-03 07:23:58,008] multiqc.plots.linegraph [DEBUG ] Using matplotlib version 3.3.2 [2021-08-03 07:23:58,016] multiqc.modules.custom_content.custom_content [INFO ] run_stats: Found 1 samples (table) [2021-08-03 07:23:58,026] multiqc.modules.custom_content.custom_content [INFO ] undetermined_barcodes: Found 20 samples (table) [2021-08-03 07:23:58,035] multiqc.modules.custom_content.custom_content [INFO ] demux_report: Found 17 samples (table) [2021-08-03 07:23:58,038] multiqc [DEBUG ] No samples found: conpair [2021-08-03 07:23:58,042] multiqc [DEBUG ] No samples found: peddy [2021-08-03 07:23:58,046] multiqc [DEBUG ] No samples found: somalier [2021-08-03 07:23:58,049] multiqc [DEBUG ] No samples found: methylQA [2021-08-03 07:23:58,055] multiqc [DEBUG ] No samples found: mosdepth [2021-08-03 07:23:58,058] multiqc [DEBUG ] No samples found: phantompeakqualtools [2021-08-03 07:23:58,061] multiqc [DEBUG ] No samples found: qualimap [2021-08-03 07:23:58,065] multiqc [DEBUG ] No samples found: preseq [2021-08-03 07:23:58,068] multiqc [DEBUG ] No samples found: quast [2021-08-03 07:23:58,072] multiqc [DEBUG ] No samples found: qorts [2021-08-03 07:23:58,076] multiqc [DEBUG ] No samples found: rna_seqc [2021-08-03 07:23:58,080] multiqc [DEBUG ] No samples found: rockhopper [2021-08-03 07:23:58,083] multiqc [DEBUG ] No samples found: rsem [2021-08-03 07:23:58,090] multiqc [DEBUG ] No samples found: rseqc [2021-08-03 07:23:58,093] multiqc [DEBUG ] No samples found: busco [2021-08-03 07:23:58,097] multiqc [DEBUG ] No samples found: goleft_indexcov [2021-08-03 07:23:58,100] multiqc [DEBUG ] No samples found: disambiguate [2021-08-03 07:23:58,104] multiqc [DEBUG ] No samples found: supernova [2021-08-03 07:23:58,112] multiqc [DEBUG ] No samples found: deeptools [2021-08-03 07:23:58,115] multiqc [DEBUG ] No samples found: sargasso [2021-08-03 07:23:58,118] multiqc [DEBUG ] No samples found: verifybamid [2021-08-03 07:23:58,122] multiqc [DEBUG ] No samples found: mirtrace [2021-08-03 07:23:58,125] multiqc [DEBUG ] No samples found: happy [2021-08-03 07:23:58,129] multiqc [DEBUG ] No samples found: mirtop [2021-08-03 07:23:58,133] multiqc [DEBUG ] No samples found: homer [2021-08-03 07:23:58,137] multiqc [DEBUG ] No samples found: macs2 [2021-08-03 07:23:58,140] multiqc [DEBUG ] No samples found: theta2 [2021-08-03 07:23:58,143] multiqc [DEBUG ] No samples found: snpeff [2021-08-03 07:23:58,148] multiqc [DEBUG ] No samples found: gatk [2021-08-03 07:23:58,151] multiqc [DEBUG ] No samples found: htseq [2021-08-03 07:23:58,155] multiqc [DEBUG ] No samples found: bcftools [2021-08-03 07:23:58,158] multiqc [DEBUG ] No samples found: featureCounts [2021-08-03 07:23:58,162] multiqc [DEBUG ] No samples found: fgbio [2021-08-03 07:23:58,171] multiqc [DEBUG ] No samples found: dragen [2021-08-03 07:23:58,175] multiqc [DEBUG ] No samples found: dedup [2021-08-03 07:23:58,178] multiqc [DEBUG ] No samples found: damageprofiler [2021-08-03 07:23:58,192] multiqc [DEBUG ] No samples found: biobambam2 [2021-08-03 07:23:58,195] multiqc [DEBUG ] No samples found: mtnucratio [2021-08-03 07:23:58,198] multiqc [DEBUG ] No samples found: picard [2021-08-03 07:23:58,201] multiqc [DEBUG ] No samples found: prokka [2021-08-03 07:23:58,205] multiqc [DEBUG ] No samples found: samblaster [2021-08-03 07:23:58,210] multiqc [DEBUG ] No samples found: samtools [2021-08-03 07:23:58,213] multiqc [DEBUG ] No samples found: sexdeterrmine [2021-08-03 07:23:58,217] multiqc [DEBUG ] No samples found: bamtools [2021-08-03 07:23:58,220] multiqc [DEBUG ] No samples found: jellyfish [2021-08-03 07:23:58,225] multiqc [DEBUG ] No samples found: vcftools [2021-08-03 07:23:58,229] multiqc [DEBUG ] No samples found: longranger [2021-08-03 07:23:58,232] multiqc [DEBUG ] No samples found: stacks [2021-08-03 07:23:58,236] multiqc [DEBUG ] No samples found: varscan2 [2021-08-03 07:23:58,244] multiqc [DEBUG ] No samples found: bbmap [2021-08-03 07:23:58,248] multiqc [DEBUG ] No samples found: bismark [2021-08-03 07:23:58,252] multiqc [DEBUG ] No samples found: biscuit [2021-08-03 07:23:58,255] multiqc [DEBUG ] No samples found: hicexplorer [2021-08-03 07:23:58,259] multiqc [DEBUG ] No samples found: hicup [2021-08-03 07:23:58,262] multiqc [DEBUG ] No samples found: hicpro [2021-08-03 07:23:58,265] multiqc [DEBUG ] No samples found: salmon [2021-08-03 07:23:58,269] multiqc [DEBUG ] No samples found: kallisto [2021-08-03 07:23:58,272] multiqc [DEBUG ] No samples found: slamdunk [2021-08-03 07:23:58,276] multiqc [DEBUG ] No samples found: star [2021-08-03 07:23:58,279] multiqc [DEBUG ] No samples found: hisat2 [2021-08-03 07:23:58,283] multiqc [DEBUG ] No samples found: tophat [2021-08-03 07:23:58,286] multiqc [DEBUG ] No samples found: bowtie2 [2021-08-03 07:23:58,290] multiqc [DEBUG ] No samples found: bowtie1 [2021-08-03 07:23:58,293] multiqc [DEBUG ] No samples found: snpsplit [2021-08-03 07:23:58,296] multiqc [DEBUG ] No samples found: kat [2021-08-03 07:23:58,299] multiqc [DEBUG ] No samples found: leehom [2021-08-03 07:23:58,303] multiqc [DEBUG ] No samples found: adapterRemoval [2021-08-03 07:23:58,306] multiqc [DEBUG ] No samples found: clipandmerge [2021-08-03 07:23:58,310] multiqc [DEBUG ] No samples found: cutadapt [2021-08-03 07:23:58,313] multiqc [DEBUG ] No samples found: flexbar [2021-08-03 07:23:58,316] multiqc [DEBUG ] No samples found: kaiju [2021-08-03 07:23:58,320] multiqc [DEBUG ] No samples found: kraken [2021-08-03 07:23:58,324] multiqc [DEBUG ] No samples found: malt [2021-08-03 07:23:58,327] multiqc [DEBUG ] No samples found: trimmomatic [2021-08-03 07:23:58,330] multiqc [DEBUG ] No samples found: sickle [2021-08-03 07:23:58,334] multiqc [DEBUG ] No samples found: skewer [2021-08-03 07:23:58,337] multiqc [DEBUG ] No samples found: sortmerna [2021-08-03 07:23:58,340] multiqc [DEBUG ] No samples found: biobloomtools [2021-08-03 07:23:58,343] multiqc [DEBUG ] No samples found: fastq_screen [2021-08-03 07:23:58,347] multiqc [DEBUG ] No samples found: afterqc [2021-08-03 07:23:58,350] multiqc [DEBUG ] No samples found: fastp [2021-08-03 07:23:59,437] multiqc.modules.fastqc.fastqc [INFO ] Found 34 reports [2021-08-03 07:24:00,130] multiqc [DEBUG ] No samples found: pycoqc [2021-08-03 07:24:00,133] multiqc [DEBUG ] No samples found: minionqc [2021-08-03 07:24:00,137] multiqc [DEBUG ] No samples found: multivcfanalyzer [2021-08-03 07:24:00,141] multiqc [DEBUG ] No samples found: clusterflow [2021-08-03 07:24:00,144] multiqc [DEBUG ] No samples found: bcl2fastq [2021-08-03 07:24:00,147] multiqc [DEBUG ] No samples found: interop [2021-08-03 07:24:00,151] multiqc [DEBUG ] No samples found: ivar [2021-08-03 07:24:00,154] multiqc [DEBUG ] No samples found: flash [2021-08-03 07:24:00,158] multiqc [DEBUG ] No samples found: seqyclean [2021-08-03 07:24:00,158] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module 'Demultiplexing Report'. [2021-08-03 07:24:00,158] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module 'Run Statistics'. [2021-08-03 07:24:00,158] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module ' Barcodes of Undetermined Reads'. [2021-08-03 07:24:00,158] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module 'FastQC'. [2021-08-03 07:24:00,200] multiqc [INFO ] Compressing plot data [2021-08-03 07:24:00,806] multiqc [INFO ] Report : multiqc_report.html [2021-08-03 07:24:00,806] multiqc [INFO ] Data : multiqc_data [2021-08-03 07:24:00,806] multiqc [DEBUG ] Moving data file from '/state/partition1/job-9133098/tmpg0bkrzdv/multiqc_data' to '/scratch/gencore/logs/html/H2HY5AFX3/merged/multiqc_data' [2021-08-03 07:24:00,915] multiqc [INFO ] MultiQC complete