FastQCFastQC Report
Thu 4 Apr 2024
H2G7GDRX5_n01_MTS_1.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH2G7GDRX5_n01_MTS_1.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences162
Sequences flagged as poor quality0
Sequence length28
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAGATAGGTTCCAAACAATTAGTCTTCA10.6172839506172839No Hit
CTCAACCAGCCTCTGGCAGTGGTTCCGG10.6172839506172839No Hit
TTGAACGGTATCCTCCCTAGAAGTGTTA10.6172839506172839No Hit
GTCCTCAGTACTTCCCGAGCACTTACCT10.6172839506172839No Hit
GGAATGGTCTGAGAGGCAACCAGATCCG10.6172839506172839No Hit
ACTATCTGTAGTAAGTAAGGCGGTGCAT10.6172839506172839No Hit
GTCACTCAGTCACGCCTTATCACGGCAT10.6172839506172839No Hit
TTAGGCATCAAGTTGCCAATTTCTCCTC10.6172839506172839No Hit
TTGCCTGGTATATGGACAAAAGTACTTC10.6172839506172839No Hit
TCAGGTATCATGCAGTTGAAGCGCATCA10.6172839506172839No Hit
TACCGAACACCCTCTACTAATCTGAGAG10.6172839506172839No Hit
CTTTCGGAGGACTATATGCATTGGCTTT10.6172839506172839No Hit
CCCTCTCCATGGCCACTCACGCGCCTAG10.6172839506172839No Hit
CTAGGTATCTTTGCTAGCCCAAGCGTGG10.6172839506172839No Hit
TCACACCGTTAGGAGCCTGGCTCAGTCC10.6172839506172839No Hit
GTCTAGAAGGTCATTCCCCATTGCCTGC10.6172839506172839No Hit
ATCGGATGTACGTGAGGTCATTTTCGAG10.6172839506172839No Hit
CCCTCTCCATCTACCAAAACGACCGGAA10.6172839506172839No Hit
GCACGGTTTCACGTTCTATTTCACTACC10.6172839506172839No Hit
AAACGCTTCATTTCCACTCTCCTCGTAC10.6172839506172839No Hit
TGGATCAAGCAGTAATCGGTTGAAGGGG10.6172839506172839No Hit
TTTGGAGAGGATCATAGACAGTTTTGTT10.6172839506172839No Hit
AAGATAGGTACGACAGATTCCGCCGGAG10.6172839506172839No Hit
GTTAGTCGTTAAACCCTACCATCCAACT10.6172839506172839No Hit
TTGTGTTGTGACGCCTAATGTCTGTGAT10.6172839506172839No Hit
TTTACACAAATAATATAATTAATAAACA10.6172839506172839No Hit
ATGGGAGTCTTGTTACAATAGAGCATCC10.6172839506172839No Hit
GTACAACGTCCTACGGCACACTATATAA10.6172839506172839No Hit
AACAACCAGTAACCTCTCCCCCTCGAAA10.6172839506172839No Hit
AAGCGAGGTCCTCAGGGTGTAAGCTTGG10.6172839506172839No Hit
GTAATCGGTTGGACCCAAACCTGCAATG10.6172839506172839No Hit
CTGGCAGTCGCCAACGCGTTCCTGACAC10.6172839506172839No Hit
TATTTCGGTGTTATCGTGGGGGCGTGCT10.6172839506172839No Hit
GATTCTTTCCACTTTAACCTCAATGTTA10.6172839506172839No Hit
TGTCAGTCAACTGGTTACATGGGTCAGG10.6172839506172839No Hit
TCCTCCCTCAAGTGGGGTTAGGCAGCGT10.6172839506172839No Hit
TTCGCTGTCCAGTACAACCTGCGACGGG10.6172839506172839No Hit
CTAATACCAACCAATCTTAAAACAAACA10.6172839506172839No Hit
TGGATCATCTGTCCGTAAATGTCGACTA10.6172839506172839No Hit
GACTTCCTCATTCATCTGATCTGTCATG10.6172839506172839No Hit
GATGCTAGTACCCAGCTACGCATGCTGT10.6172839506172839No Hit
CTGTCGTTCCCATACCATTTTTCCGCGG10.6172839506172839No Hit
GGGCTACGTTACGGAGTGCGGTTTTTTA10.6172839506172839No Hit
CGAAGTTGTTCCCAAACGTCCACGTTAG10.6172839506172839No Hit
CCAAGCGTCTATTGTCGTGTTTACTGAT10.6172839506172839No Hit
GAGACCCAGCACCTGCCTAGTTTCGGAA10.6172839506172839No Hit
TCCTCTTCCGATCTTCCTCTTCAATTAC10.6172839506172839No Hit
CTCCACAGTCTTTCTATCTACTCTGATA10.6172839506172839No Hit
TGTCAGAGTCATTCCCGCCCAAAATCGA10.6172839506172839No Hit
AGAGCAGCATGAAAGTATGAGTCGGTAG10.6172839506172839No Hit
TTCCTCTTCGATTGACTATTATAGAGGA10.6172839506172839No Hit
TACGTCCAGTATGAACGAAACACTGCAA10.6172839506172839No Hit
ATTTACCGTTCATCTTTCTTTTTGTACT10.6172839506172839No Hit
ACTTTCATCATTCTTGATTTCTGTTTCG10.6172839506172839No Hit
ATCACTTCATCACGGCCCCATCACAACA10.6172839506172839No Hit
TGCAGATAGCTAGCCCCGTACAGATATG10.6172839506172839No Hit
TCCAGAATCATGGCCGCTCATACATACG10.6172839506172839No Hit
TATTGGGGTTCGGGTCAGAGATTAAAGC10.6172839506172839No Hit
AATTTCCGTGTCCTAACCTAGTTTATAT10.6172839506172839No Hit
GGGACTCCAAGACGACCGCTAGATGGTG10.6172839506172839No Hit
CATTCTAGTTCTTCATTCTCATGGAAAT10.6172839506172839No Hit
CATTTCAGTTGCCATAAATGGGGAGTGT10.6172839506172839No Hit
TGCGATAAGCCTGCCATAACTCGAGGAG10.6172839506172839No Hit
GTAATGCTCGTTGTTTGGGTGCGTGCGG10.6172839506172839No Hit
GTCTTTATCCTCTTTCACTTTCGATTCA10.6172839506172839No Hit
CCAATGACACATAGCTTTCCTTGATCTT10.6172839506172839No Hit
ATGGATCGTTGCCGCACTGGCCTTCAAG10.6172839506172839No Hit
CGCGCCAGTCGAGATAGGGCCCGTAGCC10.6172839506172839No Hit
CATCCCACAGAGCTAGCTGCTAAAAACG10.6172839506172839No Hit
TGCTCGTCAGAAATTGTTGTTTAGGGCC10.6172839506172839No Hit
ACTTTGTGTCTGGTTAAAACTTTCCGTT10.6172839506172839No Hit
AGCGCTGAGAGCCCAACCTCACGTGTAT10.6172839506172839No Hit
ATTCTTTTGTTCCACACGAGATTTCTGT10.6172839506172839No Hit
GTTTACTCAAATAGCATACTACATCAAC10.6172839506172839No Hit
AGACGCGCAATAGTGAGCTCGATAGGCC10.6172839506172839No Hit
TTTCAGACATTTAATTCTCCCCAAAAAT10.6172839506172839No Hit
ATTTCACCAACGACTTTTGGCAGCCGCC10.6172839506172839No Hit
CATGCCTGTGCTGATTCGGGCCGCGCAC10.6172839506172839No Hit
TCACTCGTCTTGGGCGCAGAATTTTGGC10.6172839506172839No Hit
TTGGGGTCCCGACAGGCGTGCTCCAACT10.6172839506172839No Hit
CTACCCATCTGGGATTTTCGACGAAATG10.6172839506172839No Hit
ATCTTCATCCTTCGACGCGATTTATGGG10.6172839506172839No Hit
ATAGACCCGATCTATAGACCGTTGTCCC10.6172839506172839No Hit
ACATTTCAGGTCTGGATGCACAGTGTGG10.6172839506172839No Hit
TGATCAGGTCGTACATAATTGCTACCGG10.6172839506172839No Hit
ACGTCCTCACGACGTCTCATATGTTGGC10.6172839506172839No Hit
ATCAGGTCAGACGCTCTAATATTGGCCT10.6172839506172839No Hit
GGTGTCGAGCACTTTGACTCTCCCATCC10.6172839506172839No Hit
TCATTGTGTTAAAGTGAGAATGTAGGCG10.6172839506172839No Hit
TTCACCGAGATCCTACACTTGCACCGAG10.6172839506172839No Hit
TGAGGTTGTGTGTACTAGGCAGCCTCAA10.6172839506172839No Hit
TGGGCGTTCGGAGTAGGGCAATAGCTAG10.6172839506172839No Hit
GGCACGTTCGAACGCCGAACCAGTTGGA10.6172839506172839No Hit
GCTGGGTAGGTGATATTCCCAAGTTTCG10.6172839506172839No Hit
CCTGCATAGGGTGAGGACTTGTTTCGGT10.6172839506172839No Hit
CTATCCGAGTCGAGGTGTATGGTACAAA10.6172839506172839No Hit
AGGTCTATCACTCACCAATCGCACATGT10.6172839506172839No Hit
TTGGTTTAGATGAATCCTAGCTTAGTAC10.6172839506172839No Hit
CAGCGTGAGGTGAGCTGAAATCGAAACA10.6172839506172839No Hit
GTGAGCATTTTCATCCCGAAGTTGCGGC10.6172839506172839No Hit
GACCGTGTCAAGTTGCAGGTTTCGAGCC10.6172839506172839No Hit
TGAGGAGGTCGTTGCGGTTAGCACATAG10.6172839506172839No Hit
GATCCCTGTTGTAAGCAAGATCGGGGAT10.6172839506172839No Hit
AGCCACGAGATTGACAGGTAGTCGCGCG10.6172839506172839No Hit
TAGGAGGGTCGAGCTCGTGTTGAAGATG10.6172839506172839No Hit
ATCGTGATCCCGAGGTCCCAAATATGAG10.6172839506172839No Hit
TGCGACGCAGGACTTTACGAACGCAAGT10.6172839506172839No Hit
ACTTCCGGTAGCCTTTATATATTATTCG10.6172839506172839No Hit
GTGTAACGTCAGCGTCTACTGTGGTTCG10.6172839506172839No Hit
CACACAAAGCCAAGGTTGGTGGGCCAGA10.6172839506172839No Hit
TCAAGCAAGAGAACCCGCCGTCCAACTC10.6172839506172839No Hit
TCAAGACAGGGAGAATCATGCCGCATCT10.6172839506172839No Hit
AACAAGACATAAGCGGATTTTTGACCAT10.6172839506172839No Hit
TTATTGCAGTGCCTCGATTTCTTGCTGG10.6172839506172839No Hit
GTAACACCAGTCAACTGAGATCCCAACA10.6172839506172839No Hit
ACTATGGAGACTCTACTTGACCTGCAGG10.6172839506172839No Hit
GGGTCACCATGAAAGTAGTCTCGTCTGG10.6172839506172839No Hit
GTTTGGAAGTGCACCCCTTCGGCCGGAA10.6172839506172839No Hit
CTCAATTCACCGGTCATCGAAATTCTTG10.6172839506172839No Hit
CAGCCAGGTGTACAGGAGCCATCAATTC10.6172839506172839No Hit
CGGGACTGTCTGTCCTCTGCCGCTTAGC10.6172839506172839No Hit
GGTAATCAGGTAAAGGCCTCTGGGAGGA10.6172839506172839No Hit
TCTGTCGGTACAGGTGGGTGTAGGGCGG10.6172839506172839No Hit
ATCAGGTGTACTTGTGCCGTTACCTGCG10.6172839506172839No Hit
GCTGCAGTCAAGCTGTATTATATCAAAG10.6172839506172839No Hit
ATCGCCTGTGATCCTTACCCAGTTCGAC10.6172839506172839No Hit
GAGGGATCATGTTCGATACGTATAAGGA10.6172839506172839No Hit
AGCAGTTACATTAACACCATCCTACAAG10.6172839506172839No Hit
GGCTTGGTCTAATTCCCTCCTGTGTCCA10.6172839506172839No Hit
ATTCACTGTACTCGCGACTAAATGGGGG10.6172839506172839No Hit
GGTTCTCCATACGCATGCTCCGTTTTTT10.6172839506172839No Hit
CCAATGAGTTAAGGATTTCTGTAGCGCA10.6172839506172839No Hit
TAACTAAGATCTTCAACAACTAAAATGT10.6172839506172839No Hit
GATCGTGCAACCTATGCCGTGATGTCTC10.6172839506172839No Hit
ATGCGATGTAATGATGCTAAAAGCAGTA10.6172839506172839No Hit
CTGCAGGCAATAGTGATGGAAAAATGCG10.6172839506172839No Hit
TTCATGTTCTAGTGTGGTTTAAAATTGG10.6172839506172839No Hit
ACACCAAAGTAAACACCCTTTGCCTATC10.6172839506172839No Hit
GGGTTATGTACAAGTAATCATCGCGAGT10.6172839506172839No Hit
AGTGCCGTCACTACTTCCACTCAGCCGG10.6172839506172839No Hit
TCAGCCTGTCTTGTCCCAGCAGTTGAGG10.6172839506172839No Hit
TGCCGAGTCAATGCACCCTACGTACCAC10.6172839506172839No Hit
GACACGCAGTTTGAGAGTTTAAATAAGC10.6172839506172839No Hit
CAATACGGTCCGGATCATGTCCTCGACC10.6172839506172839No Hit
AGTACCATCATTGGTGGGTTTGGTACGC10.6172839506172839No Hit
TGCAGTAGTGACACAGTGGGAGTCGAGG10.6172839506172839No Hit
GATGATCAGCAGTAATTCCGGCCGAGGG10.6172839506172839No Hit
GCAGCCACACTGAGGATAACAAGTAAGT10.6172839506172839No Hit
AATTCCTAGTGGAAGATCTAAGATTTCG10.6172839506172839No Hit
TCACATTAGCGCTGCTCTGCAAAAAAGA10.6172839506172839No Hit
GCCGATGAGCAACCAGTAGCATCGCATG10.6172839506172839No Hit
CTACGAAACATTAACCAATAAACCAATA10.6172839506172839No Hit
TCGGATACAGTATACCCACCTTGGTTTG10.6172839506172839No Hit
TCGTAGAAGTGAGCCAGACATACAGCCT10.6172839506172839No Hit
TACCCGTTCTGCGGGTTAATTTTGCCGG10.6172839506172839No Hit
CGGAATTGTAGACGTGGATGACTGACCT10.6172839506172839No Hit
TCCTCCCAGGAGTCTGCTGCGGGTACTT10.6172839506172839No Hit
CTGTATTCATTGCTTTAGTATTCGCGGA10.6172839506172839No Hit
TGAGCATGTTGGCCGTCGTATGTTCGCG10.6172839506172839No Hit
GCCTGTTCAGGCTACCGGCAGTTAAATT10.6172839506172839No Hit
TAAGCCAGTGTTGAGGCGCCCGGCTTGG10.6172839506172839No Hit
GGGTAGAGTGTCCACGGCCGTTGTTGCG10.6172839506172839No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)