FastQCFastQC Report
Sat 16 Mar 2024
H2G77DRX5_n02_Ath_Zm_Fresh_SB.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH2G77DRX5_n02_Ath_Zm_Fresh_SB.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences386488767
Sequences flagged as poor quality0
Sequence length71
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA24513650.6342655231684909No Hit
CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA4241310.10973954127882841No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)