H2FN2BGX3_n01_meseq_07.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H2FN2BGX3_n01_meseq_07.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	17557199
Sequences flagged as poor quality	0
Sequence length	75
%GC	41

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATGAAATAGGATGAATTGAGACGGTATTTTGTAAATACGTAATTATCTTGAATATATTAACTATTTCTTTATTT	111578	0.635511393360638	No Hit
TAAAGGCGTAAGAATTGTATCCTTGTTAGAAGACACAAAGCCAAAGACTCATATGGACTTTGGCTACACCATGAA	48041	0.2736256506519064	No Hit
CCTGCGGGAATTATTTGGAAGATCAAAAAAGAGTGGTATTTGCTAGCAACAACATAATGGAGGCAGTCAATCAAT	47207	0.26887546242427396	No Hit
CCCCCCGGAACCCAAAAACTTTGATTTCTCATAAGGTGCCAGCGGAGTCCTATAAGCAACATCCGCTGATCCCTG	39281	0.22373158725375272	No Hit
TGTAGCACTTACCAATGAGGCCCTATCAATTAGTATTACACAGAAGAAATCAATTATAGACACTAATACAATTAG	27462	0.1564144713516091	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	24362	0.1387578964047739	No Hit
CCACAACAACGAAAGCACTTTTTCACTCTTTCCTATACTAGGGGATTTCACTTGGAAAAGAAAATGTTCCATACT	22337	0.12722416599595412	No Hit
GGTGTATCATAAGGGATTTGCCTTTTCTATTGATTCCTACGGATTGGATCAAAGACAATTCTTGAAGGAGGTTTT	20561	0.11710865725221888	No Hit
AACAGACCGGTAGACTTGAACCTTGTTCCTACATGACCTGATCAATTCGATCAGGCACTCGCCATCTATTTTCAT	19069	0.10861071860038722	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCGTAAG	28965	56.283844	6
AGGCGTA	27555	55.79706	4
AAGGCGT	27015	55.507607	3
CGGTATT	15840	55.01482	23
ACGGTAT	15845	54.714527	22
AATACGT	16015	54.575096	35
TAAAGGC	28965	54.567043	1
GGCGTAA	28145	54.54162	5
GTATCCT	38300	54.446606	17
AAAGGCG	27910	54.2962	2
GCTACAC	54530	54.162262	63
TGGCTAC	53415	54.022327	61
TGAGACG	16070	53.969456	18
GGCTACA	53910	53.89662	62
ATACGTA	16240	53.83962	36
CTACACC	56005	53.739178	64
GGACTTT	55020	53.243656	55
CTTGTTA	67070	53.154236	22
CGTAATT	16445	52.94815	39
TGTTAGA	62710	52.86864	24