H2CYMAFXY_n02_346_nextera.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H2CYMAFXY_n02_346_nextera.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3654547
Sequences flagged as poor quality	0
Sequence length	150
%GC	44

Per base quality graph

$Per base quality graph$

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTTATAGCAACGCAAAAAATGGATGAACACAGCTGTGTCCTGTGAACTC	9647	0.26397252518574804	No Hit
GTAGAAACACGAGCCAAAATAAAACTCTTTTCCTTATAAATTACACAATC	7822	0.21403473535844525	No Hit
AGAAACAACAGCTATGAGTGACTTGGCTAAGATTCACCCATGGGTCACTC	6741	0.18445514587717712	No Hit
AAATTACACAATCTCAGTTATTTCTTTATAGCAACGCAAAAAATGGATGA	6258	0.17123873355575944	No Hit
GTAGTAACAAGAGCGAAACCCCATCTCAAAAAAACAAAACCCAAAACACC	5986	0.1637959506335532	No Hit
AAACAACAGCTCTCGAGATTGGGAATAGGTAATAAAGAAAATGAATCCTG	5237	0.143300934424978	No Hit
CCTCCACCAGCTTCAGCTGAAGCCTCTGAACATCTCCAGCATGGAAGAAG	4669	0.12775865244037088	No Hit
GTAGAAACACGTGCCAAAATAAAACTCTTTTCCTTATAAATTACACAATC	4603	0.12595268305483553	No Hit
ATCTCAGTTATTTCTTTATAGCAACGCAAAAAATGGATGAACACAGCTGT	4561	0.12480342980949485	No Hit
GTAGAAACAACAGCTCTCGAGATTGGGAATAGGTAATAAAGAAAATGAAT	3788	0.10365169746072496	No Hit
AGTAGAAACAACAGCTCTCGAGATTGGGAATAGGTAATAAAGAAAATGAA	3666	0.1003133904147354	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTAGTAA	5760	101.679344	1
TAGTAAC	6385	91.36291	2
AAACACG	6400	86.18687	5
TAACAAG	6985	80.51502	5
AACACGA	4370	80.40832	6
GTAACAA	7270	78.450356	4
AGCACGC	1850	74.76428	1
AACACGT	2855	74.400955	6
ACGAGCC	2855	73.399155	9
GCACGCA	1920	72.39388	2
GTAGAAA	12025	69.91179	1
ACACGAG	5030	68.85378	7
CGCACTT	1755	66.06038	5
AGTAACA	8955	65.298996	3
ACACGTG	3295	63.371395	7
CACGAGC	5525	62.81444	8
GCGGTGA	365	59.187855	4
AAGCGGT	635	57.841858	2
TAGAAAC	14630	56.95539	2
GAAACAC	9810	56.376278	4