H2CYMAFXY_n02_337_nextera.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H2CYMAFXY_n02_337_nextera.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3159994
Sequences flagged as poor quality	0
Sequence length	150
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

$Per sequence GC content graph$

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTCTCGCTCTGTCGTCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCAC	5645	0.1786395796954045	No Hit
GTAGTAACAAGAGCGAAACCCCATCTCAAAAAAACAAAACCCAAAACACC	5409	0.171171211084578	No Hit
GTAGTAACAAGAGCTCTCGAGATTGGGAATAGGTAATAAAGAAAATGAAT	5276	0.16696234233356141	No Hit
GTAGTAACAAGAGCTATGTTTAGGTCTCTCTCTCCTTGACACCTGACACA	5245	0.16598132781264774	No Hit
AGCACGCACTTGAGGGGAAAGCAAAAGGAGCAAGGAGGCGGTGGAGGCAG	4917	0.15560156126878721	No Hit
GTAGTAACAAGAGCCGTTCAGATCCAAGCCACTGTTAAAAATCCAAGTAG	3812	0.12063314044267173	No Hit
ATATATATCTTCACACAAATATGAAAGTCAGCTCTAGAAATAACAGAATG	3720	0.11772174250963768	No Hit
CTTTATAGCAACGCAAAAAATGGATGAACACAGCTGTGTCCTGTGAACTC	3607	0.1141457863527589	No Hit
CTGTCGTCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCT	3502	0.11082299523353525	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTAGTAA	10985	120.199814	1
TAGTAAC	11065	119.31566	2
GTAACAA	11325	117.25	4
AGTAACA	12505	106.133484	3
TAACAAG	12805	103.63219	5
AAGAGCG	2185	95.568794	9
CGCACTT	2030	92.22024	5
ACAAGAG	14820	89.0046	7
AACAAGA	15750	84.07175	6
CAAGAGC	16215	80.77016	8
CTCGCTC	2420	77.96446	3
ACGCACT	2470	77.54876	4
GCACGCA	2455	75.39942	2
TCGCTCT	2510	75.16535	4
AGCACGC	2505	72.75355	1
GTCTCGC	2745	72.165855	1
CGCTCTG	2800	66.60251	5
AAACACG	5075	65.405426	5
TCTGTCG	2865	65.34071	8
AAGCGGT	440	63.840797	2