FastQCFastQC Report
Wed 18 Dec 2019
H2CVLAFX2_n02_HALO-bZIP63_SBP-bZIP53_col_B_m.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH2CVLAFX2_n02_HALO-bZIP63_SBP-bZIP53_col_B_m.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16989911
Sequences flagged as poor quality0
Sequence length76
%GC39

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCCCTG7909.276846E-98.41847570
CAGTCCG14351.022272E-96.341657627
CGGACTG22650.06.180646
CCTACCG16053.3833203E-106.10585457
GGGGCCT11801.575183E-65.932280547
GTGTGCC47100.05.053530770
Produced by FastQC (version 0.11.5)