[2022-10-05 17:08:30,032] multiqc                                            [DEBUG  ]  No MultiQC config found: /share/apps/multiqc/1.9/lib/python3.8/site-packages/multiqc_config.yaml
[2022-10-05 17:08:30,032] multiqc                                            [DEBUG  ]  No MultiQC config found: /home/gencore/.multiqc_config.yaml
[2022-10-05 17:08:30,032] multiqc                                            [DEBUG  ]  No MultiQC config found: multiqc_config.yaml
[2022-10-05 17:08:30,033] multiqc                                            [DEBUG  ]  Loading config settings from: /home/gencore/SCRIPTS/hpcpipe/mqc_config.yaml
[2022-10-05 17:08:30,033] multiqc                                            [DEBUG  ]  New config 'report_section_order': {'demux_report': {'after': 'run_stats'}}
[2022-10-05 17:08:30,033] multiqc                                            [DEBUG  ]  Command used: /share/apps/multiqc/1.9/bin/multiqc -f -c /home/gencore/SCRIPTS/hpcpipe/mqc_config.yaml /scratch/gencore/logs/html/H2CMNAFX5/merged
[2022-10-05 17:08:31,447] multiqc                                            [WARNING]  MultiQC Version v1.13 now available!
[2022-10-05 17:08:31,447] multiqc                                            [INFO   ]  This is MultiQC v1.9
[2022-10-05 17:08:31,447] multiqc                                            [DEBUG  ]  Command     : /share/apps/multiqc/1.9/bin/multiqc -f -c /home/gencore/SCRIPTS/hpcpipe/mqc_config.yaml /scratch/gencore/logs/html/H2CMNAFX5/merged
[2022-10-05 17:08:31,447] multiqc                                            [DEBUG  ]  Working dir : /scratch/gencore/logs/html/H2CMNAFX5/merged
[2022-10-05 17:08:31,447] multiqc                                            [INFO   ]  Template    : default
[2022-10-05 17:08:31,447] multiqc                                            [DEBUG  ]  Running Python 3.8.6 (default, Oct 11 2020, 20:34:31)  [GCC Intel(R) C++ gcc 8.3.1 mode]
[2022-10-05 17:08:31,447] multiqc                                            [INFO   ]  Searching   : /scratch/gencore/logs/html/H2CMNAFX5/merged
[2022-10-05 17:08:31,448] multiqc                                            [DEBUG  ]  Analysing modules: custom_content, conpair, peddy, somalier, methylQA, mosdepth, phantompeakqualtools, qualimap, preseq, quast, qorts, rna_seqc, rockhopper, rsem, rseqc, busco, goleft_indexcov, disambiguate, supernova, deeptools, sargasso, verifybamid, mirtrace, happy, mirtop, homer, macs2, theta2, snpeff, gatk, htseq, bcftools, featureCounts, fgbio, dragen, dedup, damageprofiler, biobambam2, mtnucratio, picard, prokka, samblaster, samtools, sexdeterrmine, bamtools, jellyfish, vcftools, longranger, stacks, varscan2, bbmap, bismark, biscuit, hicexplorer, hicup, hicpro, salmon, kallisto, slamdunk, star, hisat2, tophat, bowtie2, bowtie1, snpsplit, kat, leehom, adapterRemoval, clipandmerge, cutadapt, flexbar, kaiju, kraken, malt, trimmomatic, sickle, skewer, sortmerna, biobloomtools, fastq_screen, afterqc, fastp, fastqc, pycoqc, minionqc, multivcfanalyzer, clusterflow, bcl2fastq, interop, ivar, flash, seqyclean
[2022-10-05 17:08:31,448] multiqc                                            [DEBUG  ]  Using temporary directory for creating report: /state/partition1/job-25681638/tmp_46a88wl
[2022-10-05 17:08:31,555] multiqc                                            [DEBUG  ]  File ignored by hicexplorer because it exceeded search pattern filesize limit: H2CMNAFX5_n02_Oct_sp11644hop1_fastqc.html
[2022-10-05 17:08:31,558] multiqc                                            [DEBUG  ]  File ignored by longranger/invocation because it exceeded search pattern filesize limit: H2CMNAFX5_n02_Oct_sp11644hop1_fastqc.html
[2022-10-05 17:08:31,599] multiqc                                            [DEBUG  ]  File ignored by hicexplorer because it exceeded search pattern filesize limit: H2CMNAFX5_n01_Oct_11758hop1_fastqc.html
[2022-10-05 17:08:31,601] multiqc                                            [DEBUG  ]  File ignored by longranger/invocation because it exceeded search pattern filesize limit: H2CMNAFX5_n01_Oct_11758hop1_fastqc.html
[2022-10-05 17:08:31,642] multiqc                                            [DEBUG  ]  File ignored by hicexplorer because it exceeded search pattern filesize limit: H2CMNAFX5_n01_Oct_sp11644hop1_fastqc.html
[2022-10-05 17:08:31,644] multiqc                                            [DEBUG  ]  File ignored by longranger/invocation because it exceeded search pattern filesize limit: H2CMNAFX5_n01_Oct_sp11644hop1_fastqc.html
[2022-10-05 17:08:31,684] multiqc                                            [DEBUG  ]  File ignored by hicexplorer because it exceeded search pattern filesize limit: H2CMNAFX5_n02_Oct_sp11757in_fastqc.html
[2022-10-05 17:08:31,686] multiqc                                            [DEBUG  ]  File ignored by longranger/invocation because it exceeded search pattern filesize limit: H2CMNAFX5_n02_Oct_sp11757in_fastqc.html
[2022-10-05 17:08:31,725] multiqc                                            [DEBUG  ]  File ignored by hicexplorer because it exceeded search pattern filesize limit: H2CMNAFX5_n02_Oct_11757hop1_fastqc.html
[2022-10-05 17:08:31,727] multiqc                                            [DEBUG  ]  File ignored by longranger/invocation because it exceeded search pattern filesize limit: H2CMNAFX5_n02_Oct_11757hop1_fastqc.html
[2022-10-05 17:08:31,764] multiqc                                            [DEBUG  ]  File ignored by hicexplorer because it exceeded search pattern filesize limit: undetermined_barcodes.txt
[2022-10-05 17:08:31,765] multiqc                                            [DEBUG  ]  File ignored by longranger/invocation because it exceeded search pattern filesize limit: undetermined_barcodes.txt
[2022-10-05 17:08:31,849] multiqc                                            [DEBUG  ]  File ignored by hicexplorer because it exceeded search pattern filesize limit: H2CMNAFX5_n01_Oct_11758in_fastqc.html
[2022-10-05 17:08:31,851] multiqc                                            [DEBUG  ]  File ignored by longranger/invocation because it exceeded search pattern filesize limit: H2CMNAFX5_n01_Oct_11758in_fastqc.html
[2022-10-05 17:08:31,890] multiqc                                            [DEBUG  ]  File ignored by hicexplorer because it exceeded search pattern filesize limit: H2CMNAFX5_n02_Oct_sp11757hop1_fastqc.html
[2022-10-05 17:08:31,892] multiqc                                            [DEBUG  ]  File ignored by longranger/invocation because it exceeded search pattern filesize limit: H2CMNAFX5_n02_Oct_sp11757hop1_fastqc.html
[2022-10-05 17:08:31,930] multiqc                                            [DEBUG  ]  File ignored by hicexplorer because it exceeded search pattern filesize limit: H2CMNAFX5_n02_Oct_sp11758hop1_fastqc.html
[2022-10-05 17:08:31,932] multiqc                                            [DEBUG  ]  File ignored by longranger/invocation because it exceeded search pattern filesize limit: H2CMNAFX5_n02_Oct_sp11758hop1_fastqc.html
[2022-10-05 17:08:31,970] multiqc                                            [DEBUG  ]  File ignored by hicexplorer because it exceeded search pattern filesize limit: H2CMNAFX5_n02_Oct_11757in_fastqc.html
[2022-10-05 17:08:31,972] multiqc                                            [DEBUG  ]  File ignored by longranger/invocation because it exceeded search pattern filesize limit: H2CMNAFX5_n02_Oct_11757in_fastqc.html
[2022-10-05 17:08:32,010] multiqc                                            [DEBUG  ]  File ignored by hicexplorer because it exceeded search pattern filesize limit: H2CMNAFX5_n02_Oct_sp11644in_fastqc.html
[2022-10-05 17:08:32,012] multiqc                                            [DEBUG  ]  File ignored by longranger/invocation because it exceeded search pattern filesize limit: H2CMNAFX5_n02_Oct_sp11644in_fastqc.html
[2022-10-05 17:08:32,050] multiqc                                            [DEBUG  ]  File ignored by hicexplorer because it exceeded search pattern filesize limit: H2CMNAFX5_n01_Oct_11757hop1_fastqc.html
[2022-10-05 17:08:32,052] multiqc                                            [DEBUG  ]  File ignored by longranger/invocation because it exceeded search pattern filesize limit: H2CMNAFX5_n01_Oct_11757hop1_fastqc.html
[2022-10-05 17:08:32,091] multiqc                                            [DEBUG  ]  File ignored by hicexplorer because it exceeded search pattern filesize limit: H2CMNAFX5_n02_Oct_11758hop1_fastqc.html
[2022-10-05 17:08:32,093] multiqc                                            [DEBUG  ]  File ignored by longranger/invocation because it exceeded search pattern filesize limit: H2CMNAFX5_n02_Oct_11758hop1_fastqc.html
[2022-10-05 17:08:32,131] multiqc                                            [DEBUG  ]  File ignored by hicexplorer because it exceeded search pattern filesize limit: H2CMNAFX5_n01_undetermined_fastqc.html
[2022-10-05 17:08:32,132] multiqc                                            [DEBUG  ]  File ignored by longranger/invocation because it exceeded search pattern filesize limit: H2CMNAFX5_n01_undetermined_fastqc.html
[2022-10-05 17:08:32,172] multiqc                                            [DEBUG  ]  File ignored by hicexplorer because it exceeded search pattern filesize limit: H2CMNAFX5_n01_Oct_sp7797in_fastqc.html
[2022-10-05 17:08:32,174] multiqc                                            [DEBUG  ]  File ignored by longranger/invocation because it exceeded search pattern filesize limit: H2CMNAFX5_n01_Oct_sp7797in_fastqc.html
[2022-10-05 17:08:32,215] multiqc                                            [DEBUG  ]  File ignored by hicexplorer because it exceeded search pattern filesize limit: H2CMNAFX5_n01_Oct_sp11758in_fastqc.html
[2022-10-05 17:08:32,217] multiqc                                            [DEBUG  ]  File ignored by longranger/invocation because it exceeded search pattern filesize limit: H2CMNAFX5_n01_Oct_sp11758in_fastqc.html
[2022-10-05 17:08:32,257] multiqc                                            [DEBUG  ]  File ignored by hicexplorer because it exceeded search pattern filesize limit: H2CMNAFX5_n02_Oct_sp11758in_fastqc.html
[2022-10-05 17:08:32,258] multiqc                                            [DEBUG  ]  File ignored by longranger/invocation because it exceeded search pattern filesize limit: H2CMNAFX5_n02_Oct_sp11758in_fastqc.html
[2022-10-05 17:08:32,297] multiqc                                            [DEBUG  ]  File ignored by hicexplorer because it exceeded search pattern filesize limit: H2CMNAFX5_n01_Oct_sp11644in_fastqc.html
[2022-10-05 17:08:32,298] multiqc                                            [DEBUG  ]  File ignored by longranger/invocation because it exceeded search pattern filesize limit: H2CMNAFX5_n01_Oct_sp11644in_fastqc.html
[2022-10-05 17:08:32,337] multiqc                                            [DEBUG  ]  File ignored by hicexplorer because it exceeded search pattern filesize limit: H2CMNAFX5_n02_Oct_sp7797hop1_fastqc.html
[2022-10-05 17:08:32,338] multiqc                                            [DEBUG  ]  File ignored by longranger/invocation because it exceeded search pattern filesize limit: H2CMNAFX5_n02_Oct_sp7797hop1_fastqc.html
[2022-10-05 17:08:32,378] multiqc                                            [DEBUG  ]  File ignored by hicexplorer because it exceeded search pattern filesize limit: H2CMNAFX5_n02_Oct_sp7797in_fastqc.html
[2022-10-05 17:08:32,379] multiqc                                            [DEBUG  ]  File ignored by longranger/invocation because it exceeded search pattern filesize limit: H2CMNAFX5_n02_Oct_sp7797in_fastqc.html
[2022-10-05 17:08:32,418] multiqc                                            [DEBUG  ]  File ignored by hicexplorer because it exceeded search pattern filesize limit: H2CMNAFX5_n02_Oct_11644in_fastqc.html
[2022-10-05 17:08:32,419] multiqc                                            [DEBUG  ]  File ignored by longranger/invocation because it exceeded search pattern filesize limit: H2CMNAFX5_n02_Oct_11644in_fastqc.html
[2022-10-05 17:08:32,458] multiqc                                            [DEBUG  ]  File ignored by hicexplorer because it exceeded search pattern filesize limit: H2CMNAFX5_n01_Oct_sp11757hop1_fastqc.html
[2022-10-05 17:08:32,460] multiqc                                            [DEBUG  ]  File ignored by longranger/invocation because it exceeded search pattern filesize limit: H2CMNAFX5_n01_Oct_sp11757hop1_fastqc.html
[2022-10-05 17:08:32,499] multiqc                                            [DEBUG  ]  File ignored by hicexplorer because it exceeded search pattern filesize limit: H2CMNAFX5_n01_Oct_11757in_fastqc.html
[2022-10-05 17:08:32,500] multiqc                                            [DEBUG  ]  File ignored by longranger/invocation because it exceeded search pattern filesize limit: H2CMNAFX5_n01_Oct_11757in_fastqc.html
[2022-10-05 17:08:32,539] multiqc                                            [DEBUG  ]  File ignored by hicexplorer because it exceeded search pattern filesize limit: H2CMNAFX5_n01_Oct_11644in_fastqc.html
[2022-10-05 17:08:32,541] multiqc                                            [DEBUG  ]  File ignored by longranger/invocation because it exceeded search pattern filesize limit: H2CMNAFX5_n01_Oct_11644in_fastqc.html
[2022-10-05 17:08:32,581] multiqc                                            [DEBUG  ]  File ignored by hicexplorer because it exceeded search pattern filesize limit: H2CMNAFX5_n01_Oct_sp7797hop1_fastqc.html
[2022-10-05 17:08:32,583] multiqc                                            [DEBUG  ]  File ignored by longranger/invocation because it exceeded search pattern filesize limit: H2CMNAFX5_n01_Oct_sp7797hop1_fastqc.html
[2022-10-05 17:08:32,622] multiqc                                            [DEBUG  ]  File ignored by hicexplorer because it exceeded search pattern filesize limit: H2CMNAFX5_n02_undetermined_fastqc.html
[2022-10-05 17:08:32,624] multiqc                                            [DEBUG  ]  File ignored by longranger/invocation because it exceeded search pattern filesize limit: H2CMNAFX5_n02_undetermined_fastqc.html
[2022-10-05 17:08:32,662] multiqc                                            [DEBUG  ]  File ignored by hicexplorer because it exceeded search pattern filesize limit: H2CMNAFX5_n01_Oct_sp11757in_fastqc.html
[2022-10-05 17:08:32,664] multiqc                                            [DEBUG  ]  File ignored by longranger/invocation because it exceeded search pattern filesize limit: H2CMNAFX5_n01_Oct_sp11757in_fastqc.html
[2022-10-05 17:08:32,702] multiqc                                            [DEBUG  ]  File ignored by hicexplorer because it exceeded search pattern filesize limit: H2CMNAFX5_n01_Oct_sp11758hop1_fastqc.html
[2022-10-05 17:08:32,704] multiqc                                            [DEBUG  ]  File ignored by longranger/invocation because it exceeded search pattern filesize limit: H2CMNAFX5_n01_Oct_sp11758hop1_fastqc.html
[2022-10-05 17:08:32,742] multiqc                                            [DEBUG  ]  File ignored by hicexplorer because it exceeded search pattern filesize limit: H2CMNAFX5_n02_Oct_11644hop1_fastqc.html
[2022-10-05 17:08:32,744] multiqc                                            [DEBUG  ]  File ignored by longranger/invocation because it exceeded search pattern filesize limit: H2CMNAFX5_n02_Oct_11644hop1_fastqc.html
[2022-10-05 17:08:32,785] multiqc                                            [DEBUG  ]  File ignored by hicexplorer because it exceeded search pattern filesize limit: H2CMNAFX5_n01_Oct_11644hop1_fastqc.html
[2022-10-05 17:08:32,787] multiqc                                            [DEBUG  ]  File ignored by longranger/invocation because it exceeded search pattern filesize limit: H2CMNAFX5_n01_Oct_11644hop1_fastqc.html
[2022-10-05 17:08:32,826] multiqc                                            [DEBUG  ]  File ignored by hicexplorer because it exceeded search pattern filesize limit: H2CMNAFX5_n02_Oct_11758in_fastqc.html
[2022-10-05 17:08:32,828] multiqc                                            [DEBUG  ]  File ignored by longranger/invocation because it exceeded search pattern filesize limit: H2CMNAFX5_n02_Oct_11758in_fastqc.html
[2022-10-05 17:08:33,160] multiqc.plots.bargraph                             [DEBUG  ]  Using matplotlib version 3.3.2
[2022-10-05 17:08:33,161] multiqc.plots.linegraph                            [DEBUG  ]  Using matplotlib version 3.3.2
[2022-10-05 17:08:33,175] multiqc.modules.custom_content.custom_content      [INFO   ]  demux_report: Found 15 samples (table)
[2022-10-05 17:08:33,176] multiqc.modules.custom_content.custom_content      [INFO   ]  run_stats: Found 1 samples (table)
[2022-10-05 17:08:33,186] multiqc.modules.custom_content.custom_content      [INFO   ]  undetermined_barcodes: Found 20 samples (table)
[2022-10-05 17:08:33,191] multiqc                                            [DEBUG  ]  No samples found: conpair
[2022-10-05 17:08:33,197] multiqc                                            [DEBUG  ]  No samples found: peddy
[2022-10-05 17:08:33,203] multiqc                                            [DEBUG  ]  No samples found: somalier
[2022-10-05 17:08:33,209] multiqc                                            [DEBUG  ]  No samples found: methylQA
[2022-10-05 17:08:33,219] multiqc                                            [DEBUG  ]  No samples found: mosdepth
[2022-10-05 17:08:33,224] multiqc                                            [DEBUG  ]  No samples found: phantompeakqualtools
[2022-10-05 17:08:33,227] multiqc                                            [DEBUG  ]  No samples found: qualimap
[2022-10-05 17:08:33,233] multiqc                                            [DEBUG  ]  No samples found: preseq
[2022-10-05 17:08:33,239] multiqc                                            [DEBUG  ]  No samples found: quast
[2022-10-05 17:08:33,245] multiqc                                            [DEBUG  ]  No samples found: qorts
[2022-10-05 17:08:33,250] multiqc                                            [DEBUG  ]  No samples found: rna_seqc
[2022-10-05 17:08:33,256] multiqc                                            [DEBUG  ]  No samples found: rockhopper
[2022-10-05 17:08:33,262] multiqc                                            [DEBUG  ]  No samples found: rsem
[2022-10-05 17:08:33,273] multiqc                                            [DEBUG  ]  No samples found: rseqc
[2022-10-05 17:08:33,278] multiqc                                            [DEBUG  ]  No samples found: busco
[2022-10-05 17:08:33,284] multiqc                                            [DEBUG  ]  No samples found: goleft_indexcov
[2022-10-05 17:08:33,288] multiqc                                            [DEBUG  ]  No samples found: disambiguate
[2022-10-05 17:08:33,294] multiqc                                            [DEBUG  ]  No samples found: supernova
[2022-10-05 17:08:33,307] multiqc                                            [DEBUG  ]  No samples found: deeptools
[2022-10-05 17:08:33,312] multiqc                                            [DEBUG  ]  No samples found: sargasso
[2022-10-05 17:08:33,317] multiqc                                            [DEBUG  ]  No samples found: verifybamid
[2022-10-05 17:08:33,323] multiqc                                            [DEBUG  ]  No samples found: mirtrace
[2022-10-05 17:08:33,328] multiqc                                            [DEBUG  ]  No samples found: happy
[2022-10-05 17:08:33,333] multiqc                                            [DEBUG  ]  No samples found: mirtop
[2022-10-05 17:08:33,340] multiqc                                            [DEBUG  ]  No samples found: homer
[2022-10-05 17:08:33,345] multiqc                                            [DEBUG  ]  No samples found: macs2
[2022-10-05 17:08:33,350] multiqc                                            [DEBUG  ]  No samples found: theta2
[2022-10-05 17:08:33,355] multiqc                                            [DEBUG  ]  No samples found: snpeff
[2022-10-05 17:08:33,362] multiqc                                            [DEBUG  ]  No samples found: gatk
[2022-10-05 17:08:33,367] multiqc                                            [DEBUG  ]  No samples found: htseq
[2022-10-05 17:08:33,373] multiqc                                            [DEBUG  ]  No samples found: bcftools
[2022-10-05 17:08:33,379] multiqc                                            [DEBUG  ]  No samples found: featureCounts
[2022-10-05 17:08:33,385] multiqc                                            [DEBUG  ]  No samples found: fgbio
[2022-10-05 17:08:33,399] multiqc                                            [DEBUG  ]  No samples found: dragen
[2022-10-05 17:08:33,404] multiqc                                            [DEBUG  ]  No samples found: dedup
[2022-10-05 17:08:33,410] multiqc                                            [DEBUG  ]  No samples found: damageprofiler
[2022-10-05 17:08:33,433] multiqc                                            [DEBUG  ]  No samples found: biobambam2
[2022-10-05 17:08:33,438] multiqc                                            [DEBUG  ]  No samples found: mtnucratio
[2022-10-05 17:08:33,441] multiqc                                            [DEBUG  ]  No samples found: picard
[2022-10-05 17:08:33,446] multiqc                                            [DEBUG  ]  No samples found: prokka
[2022-10-05 17:08:33,450] multiqc                                            [DEBUG  ]  No samples found: samblaster
[2022-10-05 17:08:33,459] multiqc                                            [DEBUG  ]  No samples found: samtools
[2022-10-05 17:08:33,464] multiqc                                            [DEBUG  ]  No samples found: sexdeterrmine
[2022-10-05 17:08:33,469] multiqc                                            [DEBUG  ]  No samples found: bamtools
[2022-10-05 17:08:33,474] multiqc                                            [DEBUG  ]  No samples found: jellyfish
[2022-10-05 17:08:33,481] multiqc                                            [DEBUG  ]  No samples found: vcftools
[2022-10-05 17:08:33,487] multiqc                                            [DEBUG  ]  No samples found: longranger
[2022-10-05 17:08:33,492] multiqc                                            [DEBUG  ]  No samples found: stacks
[2022-10-05 17:08:33,497] multiqc                                            [DEBUG  ]  No samples found: varscan2
[2022-10-05 17:08:33,512] multiqc                                            [DEBUG  ]  No samples found: bbmap
[2022-10-05 17:08:33,517] multiqc                                            [DEBUG  ]  No samples found: bismark
[2022-10-05 17:08:33,522] multiqc                                            [DEBUG  ]  No samples found: biscuit
[2022-10-05 17:08:33,528] multiqc                                            [DEBUG  ]  No samples found: hicexplorer
[2022-10-05 17:08:33,533] multiqc                                            [DEBUG  ]  No samples found: hicup
[2022-10-05 17:08:33,538] multiqc                                            [DEBUG  ]  No samples found: hicpro
[2022-10-05 17:08:33,543] multiqc                                            [DEBUG  ]  No samples found: salmon
[2022-10-05 17:08:33,548] multiqc                                            [DEBUG  ]  No samples found: kallisto
[2022-10-05 17:08:33,553] multiqc                                            [DEBUG  ]  No samples found: slamdunk
[2022-10-05 17:08:33,558] multiqc                                            [DEBUG  ]  No samples found: star
[2022-10-05 17:08:33,563] multiqc                                            [DEBUG  ]  No samples found: hisat2
[2022-10-05 17:08:33,568] multiqc                                            [DEBUG  ]  No samples found: tophat
[2022-10-05 17:08:33,573] multiqc                                            [DEBUG  ]  No samples found: bowtie2
[2022-10-05 17:08:33,577] multiqc                                            [DEBUG  ]  No samples found: bowtie1
[2022-10-05 17:08:33,582] multiqc                                            [DEBUG  ]  No samples found: snpsplit
[2022-10-05 17:08:33,587] multiqc                                            [DEBUG  ]  No samples found: kat
[2022-10-05 17:08:33,591] multiqc                                            [DEBUG  ]  No samples found: leehom
[2022-10-05 17:08:33,596] multiqc                                            [DEBUG  ]  No samples found: adapterRemoval
[2022-10-05 17:08:33,601] multiqc                                            [DEBUG  ]  No samples found: clipandmerge
[2022-10-05 17:08:33,606] multiqc                                            [DEBUG  ]  No samples found: cutadapt
[2022-10-05 17:08:33,611] multiqc                                            [DEBUG  ]  No samples found: flexbar
[2022-10-05 17:08:33,616] multiqc                                            [DEBUG  ]  No samples found: kaiju
[2022-10-05 17:08:33,621] multiqc                                            [DEBUG  ]  No samples found: kraken
[2022-10-05 17:08:33,626] multiqc                                            [DEBUG  ]  No samples found: malt
[2022-10-05 17:08:33,631] multiqc                                            [DEBUG  ]  No samples found: trimmomatic
[2022-10-05 17:08:33,636] multiqc                                            [DEBUG  ]  No samples found: sickle
[2022-10-05 17:08:33,641] multiqc                                            [DEBUG  ]  No samples found: skewer
[2022-10-05 17:08:33,645] multiqc                                            [DEBUG  ]  No samples found: sortmerna
[2022-10-05 17:08:33,650] multiqc                                            [DEBUG  ]  No samples found: biobloomtools
[2022-10-05 17:08:33,655] multiqc                                            [DEBUG  ]  No samples found: fastq_screen
[2022-10-05 17:08:33,660] multiqc                                            [DEBUG  ]  No samples found: afterqc
[2022-10-05 17:08:33,665] multiqc                                            [DEBUG  ]  No samples found: fastp
[2022-10-05 17:08:34,310] multiqc.modules.fastqc.fastqc                      [INFO   ]  Found 30 reports
[2022-10-05 17:08:34,569] multiqc                                            [DEBUG  ]  No samples found: pycoqc
[2022-10-05 17:08:34,574] multiqc                                            [DEBUG  ]  No samples found: minionqc
[2022-10-05 17:08:34,579] multiqc                                            [DEBUG  ]  No samples found: multivcfanalyzer
[2022-10-05 17:08:34,584] multiqc                                            [DEBUG  ]  No samples found: clusterflow
[2022-10-05 17:08:34,590] multiqc                                            [DEBUG  ]  No samples found: bcl2fastq
[2022-10-05 17:08:34,595] multiqc                                            [DEBUG  ]  No samples found: interop
[2022-10-05 17:08:34,600] multiqc                                            [DEBUG  ]  No samples found: ivar
[2022-10-05 17:08:34,605] multiqc                                            [DEBUG  ]  No samples found: flash
[2022-10-05 17:08:34,610] multiqc                                            [DEBUG  ]  No samples found: seqyclean
[2022-10-05 17:08:34,610] multiqc                                            [DEBUG  ]  Reordering sections: anchor 'demux_report' not found for module 'Demultiplexing Report'.
[2022-10-05 17:08:34,610] multiqc                                            [DEBUG  ]  Reordering sections: anchor 'demux_report' not found for module 'Run Statistics'.
[2022-10-05 17:08:34,610] multiqc                                            [DEBUG  ]  Reordering sections: anchor 'demux_report' not found for module '	Barcodes of Undetermined Reads'.
[2022-10-05 17:08:34,610] multiqc                                            [DEBUG  ]  Reordering sections: anchor 'demux_report' not found for module 'FastQC'.
[2022-10-05 17:08:34,646] multiqc                                            [INFO   ]  Compressing plot data
[2022-10-05 17:08:35,143] multiqc                                            [INFO   ]  Report      : multiqc_report.html
[2022-10-05 17:08:35,143] multiqc                                            [INFO   ]  Data        : multiqc_data
[2022-10-05 17:08:35,143] multiqc                                            [DEBUG  ]  Moving data file from '/state/partition1/job-25681638/tmp_46a88wl/multiqc_data' to '/scratch/gencore/logs/html/H2CMNAFX5/merged/multiqc_data'
[2022-10-05 17:08:35,270] multiqc                                            [INFO   ]  MultiQC complete