FastQCFastQC Report
Mon 14 May 2018
H27VGAFXY_n02_zt14wtlarvs79.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH27VGAFXY_n02_zt14wtlarvs79.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences40
Sequences flagged as poor quality0
Sequence length75
%GC34

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCGTAATACTAAAGCCCCCAAACTGCTTCTATTAATCATTACCTCTTGATCTGAAAACCAATGAAAGCAGAACAG12.5No Hit
CATGAACACATACTCGGTTGTGCCGTCGCCCAAGGTGTCGGACACCGTTGTGGAGCCCTACAACGCCACCCTGTC12.5No Hit
CCCCCCAAATCCCCACACCCTCATCCTCCCGCCAAGAATCACATGTTTGCTCGAAACAACCTTCCAACCCACATA12.5No Hit
TTTAAATTTTAATATAAAAATTAAAATTTTATATTTTTAATATATATTATAATATATATATATTTATAAAAAAAA12.5No Hit
GTAGCGGTGATCACCGCCGCGGTGACGATGACACTCATCGAGCTGATGCACAGGCGCATGGGCCCGCCGGAATCG12.5No Hit
AGACTAACTACTGCGAAAGCATTTGCCAAGGACGTTTTCATTAATCAAGAACGAAGGTTAGGGGATCAAAAACGA12.5No Hit
CTCTTAAGATTGAGCTGTGATGGGGAGAGGAAATTGTTTCCTCGAGTCGTTGATTTCACACTGCCGAGAAAAGCC12.5No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTTTTTATTAATTTTAT12.5No Hit
CAAACATGTTGACCAGCCAGGTCAGCGTGTGCAGGAAGTACAGATTCCGCGGCGTGTATTCTCCTGTCACTTATA12.5No Hit
AATTTATATTATATTATATTAATATTTATATATAAAATTATTTTTTTATATATTTTTATTTATTTTAATTAATAT12.5No Hit
GGCCAGCACACTGGCATACAGACCCCAGACCGCGACATCGACAGGCGCCGCATGGCTGTCGATCAGCAAGGGTGC12.5No Hit
GGAGGAGGGCGCGTGGCCGAGGGGGCGGGCGCGAGCAGGGGGGGGAGCTCTTGCTGGAGTAGGTCGCTGACGCCC12.5No Hit
GTGCTCTTCCGATCTTTTTTTTTTTATTTTTTATTATTTTTTTTTTTTTTTTTGTTAAAATATAAAAAAGACAGG12.5No Hit
GCTCTGGGGAGCTGTATTTAGTTTTGTATTATATTTGTTATTATGTTTGTTTAATTTTGGAAGAAAAGAAAGACG12.5No Hit
GTGCTCATCCGATATATTTTAATATTAATATTTTTTAAATTATAATTAAAAAAAAGAACAAAACAACCATACCAA12.5No Hit
GAGCTATTTAGATCTGAAGATATATAGTATAGTAATTTATTTTTTTTTATAATTTATAATTTTATATATTAATAT12.5No Hit
CAATTGGTCCTTGTTAAAGGATTTAAAGTGTACTCATTCCAATTACAGGGCCTCGGATATGAGTCTGTCTCTTAT12.5No Hit
CTTCAGATCTATATTTTAATTTATATTTTATTATTTTTTTCTGCAACTCCACCCAATGAAGTAGGATTATAAAAA12.5No Hit
TAGTATTACGACGCGAGAGGTGAAATTCTTGAACCGTCGTAAGACAAAATTAAGCGAAAGCAATTGCCAAACATG12.5No Hit
GAGCTCATACGATCATATTTATATTTTATTATTTTTTTTTTTTATATTATAATAAAAATTAAAATTTTTTATTGT12.5No Hit
GGATGGTAATGATAATGATGGCGATGATAAAGCGGTAGAGAGGTTGCTGAGCAACGATATGGTCAAAGCCTGTCT12.5No Hit
CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTTTTATTATTATTATTTTTTTTATTTAAATTTATTTTTTTA12.5No Hit
TTTAAATAATTTTATTAATTTATTTTATATTTTTATTTTTATTATATTAATTATTTTTTTTTTTAATAATATAAT12.5No Hit
CTTCCGATCTAATCAGGGGGCCTTACCAGGCTATCCTGTGGGAGCCTTCATCTTGGAGCGTGCTTCCCGCTTCAG12.5No Hit
CTACGTATCACCGCGGCTGCTGGCACGTAGTTAGCCGGTGCTTCTTTACCATTACCGTCACTCACGCTTCGTCAC12.5No Hit
TGCCATCGTACATCTCCTTGACGGCCTCGAACTCGGTCAGACCCATGCGACGCTTGTTGGAGACTGTCTCTTATA12.5No Hit
AAACGCACGTCGGCCGAGCGGCAGAAAGCTTACATTTGTCCCAATCAGCAACAAGCCACGCCCTATCGCGGCTGC12.5No Hit
AATGAAAACATCTTTGGCAAATGCTTTCGCTTAAGTTAGTCTTACGACGGTCTAAGAATCTGTCTCTTATACACA12.5No Hit
ATTCCGGGAGTTTCAGCTTTGCAACCATACTTCCCCCGGAGCCCAAAAGCTTTGGTTTCCCGGGAAGCGACTGAG12.5No Hit
TGATAGTACAATCATTATATAAATATAATTATATATATTAATAACCAGTAACTGTCACGTATACACATATGAAGA12.5No Hit
CATCAGATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTATTATTTTTTTAATATTTATTATATA12.5No Hit
TTATTTTTTTTTTTTTTTATTTTTTTTTTTTTTTTTTATTTTTATTTTTTAAATAGTTATATTAATAATAGTGAG12.5No Hit
TCTATGGGTGGTGGTGCATGGCCGTTCTTAGTTCGTGGAGTGATTTGTCTGGTTAATTCCTGTCTCTTATACACA12.5No Hit
GTAAACCTCTTTCAGTAGGGAAGAAGCGAAAGTGCCGGTACCTGCTGAAGAAGCACCGGCTAACTACGTGCCAGC12.5No Hit
TGAGATCTAACCACTATAGTTGCATACATGCAGGCATTCCAAAATCCTTATCTGTCTATTATAACAAAAGTACGT12.5No Hit
ATGATTAATAGAAGCAGTTTGGGGGCATTAGTATTACGACGCGAGAGGTGAAATTCTTGGACCGTCGTAAGACTA12.5No Hit
GCCTGAATTCGTGATGTGACCGATAGTGGATAGTACCGTGAGGGAATGGTGAAAAGTACCCCGGGAGGGGAGTGA12.5No Hit
TTTTTAAGTTTTTTATTTTTAATTTTATTTTTTAATTTTTAATTAAATAAATTTTTATTTTAGATTTATATATTT12.5No Hit
CTATTAATCATTACCTCTTGATCTGAAAACCAATGAAAGCAGAACAGAGGTCTTATTTCATTATCCCATGCACAG12.5No Hit
GTACCGACGACAGATCTTTCAAATGTCTGCCCTATCACCTTTTGATGGTAGTATCTAGGACTACCATGGTCTGTC12.5No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers