FastQCFastQC Report
Mon 14 May 2018
H27VGAFXY_n02_zt14wtlarvs47.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH27VGAFXY_n02_zt14wtlarvs47.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences63
Sequences flagged as poor quality0
Sequence length75
%GC33

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTAACTGTTAACGATCTAAGGAACCATAACTGATATAATGAGCCTTTTGCGGTTTCACTTTTAATTCGTGTGTAC11.5873015873015872No Hit
ATCGCGCAATTATTCCCCGATACACCTTTCCAACATTGTAGTCCACGATAGTAAGCATATCCCAAACTGAACCAG11.5873015873015872No Hit
GTGCTGTACGGATCTTTTATTTTTTTTTTTTTATTATTTTTTTTTTATTTTTAATGAGTGAGAAAACATGAGATG11.5873015873015872No Hit
AGAATAAAAAGTGAAACCGCAAAAGGCTCATTATATCAGTTATGGTTCCTGTCTCTTATACACATCTGACGCAGC11.5873015873015872No Hit
CTTATATGTGATTAAATACTTGTATCTTTTCATATGTTCCTCCTATTTAAAAACCTGCATTAGTGCTCTTAAACG11.5873015873015872No Hit
ATTTAACGCAGATAAAATTACATATCACAAAAAAGATTTCTTAAAGCACCCTACAAAATCATAAAAATTCAGATC11.5873015873015872No Hit
GTTGGATGCCAGCTTGGGCACCTTGATGTGCACGGAGGCACGGATGGTGGTGCCCAGGTTGGTGGGGCAGAAGGT11.5873015873015872No Hit
TGCCAGCGTTTTTGCCCTTGACGGACTCAACGGAAGCGTCGACAAAGCAGTACATGTTCACAGAAGATTGAGATA11.5873015873015872No Hit
CATCCAGAGAGGGCGCCAGACAAAAAGCTTCCACAAAAAAAGAACGCAGCAGTCGAGAAAATTACACACAAACCC11.5873015873015872No Hit
CTACCGATCTGTTTTTTTTATTATTATTTTTTTTATGAGCGTGCAGCACGGCGCCGAGCGAGTCAAGCTACACCT11.5873015873015872No Hit
ATCTACCACTAAAATGGTTAAAACGGGTAACGGGGAATCATGAATAAAAACCGGAGAGGGAGCCTGAGAAACGGC11.5873015873015872No Hit
GAATTAACCAGACAAATCACTCCACGAACTAAGAACGGCCATGCACCACCACCCATAGATTCGAGAAAGAGCTAT11.5873015873015872No Hit
CTTAAGATCATTAATATTTTTAATTTTTTTTTTATTTTTAATTATTATGATTATAATTATTAATTAGTAAAAATA11.5873015873015872No Hit
GGACTACCATGGTTGCAACGGGTAACGGGGAATCAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCA11.5873015873015872No Hit
TGGTAGTATCTAGGACTACCATGGTTGCAACGGGTAACGGGGAATCAGGGTTCGATTCCGGAGAGGGAGCCTGAT11.5873015873015872No Hit
GATATGAGTCCTGTATTGTTATTTTTCGTCACTACCTCACCTAGATGGGAGTTGGTAATTTAAGCGCCTGCTGCC11.5873015873015872No Hit
GTTTTTTTTTTTTTTGTTTTTTTTTTTATTTTTTAATAATGATAATATAATTGTTGTGAAATTGAGAAAATTAAG11.5873015873015872No Hit
GTTATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAGTACACACGAATTAAAAGTGAAACCGCAAAAGGCT11.5873015873015872No Hit
ATCTAGAACCGGTAAAATGAATTTTAAAATTTAATTATATTTAACCGAGTCTGCTCCCGAGACAGCGCCCAAATA11.5873015873015872No Hit
GCATAAGCCAGCGAGATTGCAAATTCTTGTTACATAATTAAACTAAGAAAATAAAAAGCTATTACCAAAGAAGTT11.5873015873015872No Hit
TTACCGGTGGAGTTCTTATATGTGATTAAATACTTGTATCTTTTCATATGTTCCTCCTATTTAAAAACCTGCATT11.5873015873015872No Hit
CCAAATATAAGGAAGGCCGCAGGCGCGGAAATTACCCACGCCCAGAGCGGTGAGTTAGTGCAGCAAAATAACACT11.5873015873015872No Hit
AGACCTCTGTTCTGCTTTCATTGGTTTTCAGATCAAGAGGTAATTATTAATAGAAGCAGTTTGGGGGCATTAGTC11.5873015873015872No Hit
AAACAAAACATCAAAAAACACCGACTCCCTCGAAAAATACACATTCAACATAACAACCAGCAACCAAGACACAAA11.5873015873015872No Hit
TTCAAACACAATAAGCATTTTACTGCCAACATGAATGAAGGCTACATAAGCTTCAGCACCATAATCCTGAAGATA11.5873015873015872No Hit
CTTAAAAGAGTTTTATTGTGGGACCGTAATATTACTTTAAAACTGTTTAATTTCAACAAAATAAGCTGAAGAACA11.5873015873015872No Hit
CGTCGGTACAAGACCATACGATCTGCATGATATCTAGAGTTCAACCAATATAACGATATTCCGATAGCTTGGTTT11.5873015873015872No Hit
GCAGTGTGCTGTGCGTAACGTTGATAGAGAATATAGAGGTTTTGAAGTGATAGTTTTATAGTATATAAAAAAGTT11.5873015873015872No Hit
GGGGTAGATTGCATCATCACAAACACTTCAACTTCGTTGAGTCTCGGGAGGAGACAGTGTGGCCATCGTTACGCC11.5873015873015872No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTTTTATTTTTTTTAAATTTTTTATT11.5873015873015872No Hit
TTTTTTTTTTTTTTATTTTTATATTTTTTTTTTTTATAATTTTTTTTATTTTAATATATTTTATATTAAAAAAGT11.5873015873015872No Hit
CGTTAGTATCAGCATTCGATTATATAAATTTTGGAGGAGTATGTGGAACAACTAAATGACCAATGCTTTCGCTCT11.5873015873015872No Hit
GTGCTATTCCGATCATTTTTTTTTTTTTTTTTTTTTTTTTATATAAAATTTTTAAAAAAAAAAAAAAAAAAAAGA11.5873015873015872No Hit
GACCATAGAACGTTAACAGTTACTTGGATAACAGTCCTATTTCTAGAGCTAATACATTAAATTAAAAAATGAACC11.5873015873015872No Hit
GTTCGGGTCGGTTTTGGGTTGTGGTGGGTTGGTTTTTTTTTTTTTGGGTTTGTGAGGATGTGTTTATGGTTTTTT11.5873015873015872No Hit
GTATTGTTATTTTTCGTCACTACCTCCCCGAGCTGGGAGTGGCTAATTTACGCGCCTGCTGCCTTCCTTAGATGT11.5873015873015872No Hit
GTTAGAACTAGGGCGGTATCTGATCGCCTTCGCACCTCTAACTTTCGTTCTTGATTAATGAAAACATCTTTGGCA11.5873015873015872No Hit
GTGCTCATCCGATCTATATTTTTTTTTTTTTTTTTTTTTATATATAAAAAACATGGAGATGGTATGTTGATGAAA11.5873015873015872No Hit
GAGCTATTACGAACTTTTTATTTTTTTTTTTTTTTTTTATATATTATATTTATTAAATTAAATATTTTAATTTTT11.5873015873015872No Hit
ATTCAGATCTTTTTTTTTTTTTTTTTTTTTTATTTTATTTTTTTATATTATTTTTTTTTTTTTATTTTTTAAATT11.5873015873015872No Hit
CTACCTCCCCGAGCTGGGAGTGGGTAATTTACGCGCCTGCTGCCTTCCTTAGATGTGGTAGCCGTTTCTCAGGCT11.5873015873015872No Hit
CTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTTTATTTTTTTTTTTTAATTTTTTATT11.5873015873015872No Hit
CTCAAAAAGGAACACACACATGCAGCACCAACCCCTCACACACACAACCACACACCCACACCCCAGTGACGAATT11.5873015873015872No Hit
GCACAGAATATTCAGGCATTTGAAGCCTGCTTTAAGCACTCTAATTTGTTCAAAGTAATAGTACCGGCCCACAAT11.5873015873015872No Hit
CTTAACTAAATAAATCTATACTACTAACCACAATAGTAACTTGTACTACCAGTATTAAGCAAAAGTTAAAAGACG11.5873015873015872No Hit
GCAGAACAGAGGTCTTATTTCATTATCCCATGCACAGAATATTCAGGCATTTGAAGCCTGCTTTAAGCACTCTAA11.5873015873015872No Hit
ATTTATGTTTTTTTTTGTTTTTATTTTTTTTGATATAATTATTTATATTATTTTAAATTTTTTATATAATGGATA11.5873015873015872No Hit
CCTTAGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTTGTAACCA11.5873015873015872No Hit
ATTCCGATCTTTATTTATTTTTTATTTTATTTTATTCCCAGGAACCCCAAGAAACCATGGTAATAATACAAAAAA11.5873015873015872No Hit
TTTTTAATTTTATTATTTATTTATAAATTATATTTATATAAATAATATATAATTTATATATTTATATTATAAAAA11.5873015873015872No Hit
AAGCAAAAATACGGTCAGCGAGTGCCGACGGCAGACTCACCGAGCAACACCAACTCGAGACGCTCCTCTAACAAT11.5873015873015872No Hit
CATCAAGTTCCTGAACGTGATGATGAAGAATGGATATATCGGCGAATTCGAGATATTAGACGATAATAGTTACGG11.5873015873015872No Hit
AAATACACCTTTGCACATCAGATCTTTTAATAAGTTTATTAATTTATATATGTTATAAAGTTAATTAAATAAGCA11.5873015873015872No Hit
GCAAAGTACTAAAAATTTCAAAAAATTAGAGTGCTAAAAACAGCCTTCAAATACATGAATATGTATCTTAAAAAA11.5873015873015872No Hit
CTTCGGTTCTTTTGTGTATTATTTATAATTTTTTTTATTAGTAATAAATAATTAAAAGATGTATCATAAACAAAA11.5873015873015872No Hit
CACTTACTGGGATTTCCAAGTTCATGTGAACAGTTTCTGTTCACAATCCCAAGCATGAAAGTGGTTCAGCGGTTT11.5873015873015872No Hit
GTCTATGATCGCATTCGAACCTCAAACTTTCGTGAGTGATTAAGGAAAACATATTGGGCTAATGCTGTCGCTTAA11.5873015873015872No Hit
CCTGAATATTCTGTGCATGGGATAATGAAATAAGACCTCTGTTCTGCTTTCATTGGTTTTCAGATCAAGAGGTAA11.5873015873015872No Hit
GTTCGGGTGGGGTTTATTTTTTTTTTATTTGTTGTTTGTTTTGTTATTTTTTTTTTTTTTTATATTTTGGAAATG11.5873015873015872No Hit
ATTCCGATATTTGTTTTTTTTTTTTTTTAATTTTTTGTTATTTTTAGACAATAACACCGCCACCTGGGAGAGGGT11.5873015873015872No Hit
GCCTGGATGACGCCCACGTCCGGCCACGTGCACGGCACCGCTCAGTGCAGTCCACCTCCGACAGGCTGCATGGCA11.5873015873015872No Hit
ACTTAAATTAGCACACAACGCAATCGATAGAAAGCAACTCCTAAACATCCAACTCCACAACAATTATAATAACCA11.5873015873015872No Hit
GTTCACAATCCCAAGCATCAAAGTGCTACAGCGGTTTACCCGGACCTCTCGCTGTCTCATAAACACAACTGACGC11.5873015873015872No Hit

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATGGGA50.069.044
CGTCACT50.069.027
ATGGGAG50.069.045
TTGTTAT50.069.016
GTCACTA50.069.028
TTCGTCA50.069.025
CCTGCTG50.069.067
GATATGA50.069.01
CGCCTGC50.069.065
TGGTAAT50.069.053
AATTTAA50.069.057
TAAGCGC50.069.061
CCTGTAT50.069.010
TTATTTT50.069.019
TTTTCGT50.069.023
TTTTTCG50.069.022
GTATTGT50.069.013
TGCTGCC50.069.069
TATTGTT50.069.014
TATGAGT50.069.03