FastQCFastQC Report
Mon 14 May 2018
H27VGAFXY_n02_zt14wtlarvs1.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH27VGAFXY_n02_zt14wtlarvs1.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences39
Sequences flagged as poor quality0
Sequence length75
%GC28

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG25.128205128205128No Hit
ATGTTATTTTGTTGGTTTTTGGTTTTGAGTTTTTTTTAGTGTGTTGTTAGTGTTTGTTGTATTTTTAGTTTATAT12.564102564102564No Hit
TTTTTTTATGTTTTATTTTATTTTTGTTTTATTATTTATATATTAATTTTTTTAATAATGTAATAATATAAAGTT12.564102564102564No Hit
TTTTTTTATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTTTTAAATTTATTATTTATATATATTTATTAAAT12.564102564102564No Hit
CGTGGGATGAGTGGTGTTATTGTTTTGTTATTTTGTGGATTTTATTTTTATTTTAAATATTTTGAGTGGTTAAAG12.564102564102564No Hit
AATTTATATTTTTTTAAATATATATAAAATTAATATAGTATAGTCTAGTAACTGTCTCTTATAAAAATATGAATA12.564102564102564No Hit
ATAAAAAAAAATTAAATAATTATTTATTTTTTTTTTATTTTAAATTATATTTTATATATATTAATTTATATAATT12.564102564102564No Hit
CTGCTCTGCCGATCTTTTTTTATTTATTTTTTTTTTATTTTTTTGTTTATGCATCTGCTGTCGTATTTATGAATT12.564102564102564No Hit
TAACAATGACCAAATGGATGTAATGTATGTTGAAATAATAAGCGGTAATTCCAGCTACAATAGCGTATATTAACT12.564102564102564No Hit
TATTTTTATTTTTTTTTTATTTTTATTTTTATTTATTTTTTTTATTTTTTTTTTATGTATAGTTATAGGTTAGAA12.564102564102564No Hit
ACAATCAACTGATTGGCTGTTTAATGAACTTTCTTTGCTTAAGGCAACCAATCTTATCCAAGCCGAACGATTTCG12.564102564102564No Hit
AAAAAGTGTCTTCAGATCTGTTTTAATATGATTTATTTTAATATTTTTTTTTTATTTTTAATATTTTAATAATTT12.564102564102564No Hit
TTATTAATAATTTAAAATTATTTAATATATATATTATTTATAATTTTTAAAAATAAATTATTATATTAATAATTA12.564102564102564No Hit
GCCCAGCTCCTTGTCCTTTTCCTTCTTCTCCTCGCCCAGCGAGAGGCCAACAAAGGCCACGACGGCCAGTAATAT12.564102564102564No Hit
GCGGCGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCGGGGGGGGGGGGGGGGGGGG12.564102564102564No Hit
GTTCCGGACTGTTTTTTTTGTGTTTATTTTTTATTTTTTTGGTTTTGATTGTAAGTTTTTATTTATTGTATGTAT12.564102564102564No Hit
TTTTTTTTGGTGTTTTTATATTTAGGTGTTTAATTATTTGTTTTGTTAGTATTGTGTTTTTGTTTTTGTTTGTTT12.564102564102564No Hit
CTACAGAACTTTTATATTATTTTATTTAATTTATGTTACACAAACAAACAGCCAAGAATTGATACCAAAAAGTCC12.564102564102564No Hit
CTTCCTAGCTGTGTTTTTTTTTATTTATTTTTTTGAATTATGGAAGAAGAAAATTGAAACTGTAGTATTTGTCCT12.564102564102564No Hit
GAAATATAAATAAAAAAAAAAAAATTTAAATAATTTAAAAAAAACAAAAATAAGAGCAAATATAAAGAAAGAAGC12.564102564102564No Hit
TATATAAATGTATAATTAAAAATTAATAATATATATAAAATAAATAATGAAAAGATAAAAAAGATAGTAGAATAA12.564102564102564No Hit
TTTTTGTTTGTGTGTTTTTTGTTTTTTTTTAGTATTTTTTTAGTATAGATGGTTAATTTTTTGTTTTTTTTGTGT12.564102564102564No Hit
GGCTCAGGTAAACCATCTTCCTTTCTGATCGCTGCCCCTGAGACGCTGCTCTCGGGAACATGCTCTGCGAGTCTT12.564102564102564No Hit
GGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGTGGTGGGGGGCGGGGGCGGGGGGGGCGGGGGGGGGGTGGG12.564102564102564No Hit
CTTCAGATCAGTAATGGGAGCCTTGTAATATTCCTAACAAATATTTAAATATTTTTATATATTTTTTTTTTAGCC12.564102564102564No Hit
TTTTATTATATTATTTTTATTTATATTTTTTTTTTTTTTATTTTTTTATTTTTTTTTTATTTTAAAATTTTTAAT12.564102564102564No Hit
ATTACGATATATTTTTTTTTTTTTTTTTATTTTTTATTATATATATTTTATATTATTTAATAATATTTATTATTA12.564102564102564No Hit
GTCTTACGATGTTTGTTGTTTTTTTTTTTTTTATTAATTTAATTATAAATATAAGGAGGTAATCGATGTGGAAGT12.564102564102564No Hit
GATATCTTCCGATATTTTTTTTTTTTTTATTTTTTTTTTTTTGATATAATTTGTTTTAATAAAAAGAGGGAATGA12.564102564102564No Hit
CTTCCGAACTTATTTTATTTAGAATTATTAAATATTGTATAATTTTTGTTCATAAAAACCTTATAACAAATGGGT12.564102564102564No Hit
AATACAATCATTTTTTTTTATTTTTTATTTATTATATAGAGATGAAAAACATGGACCATCGTAATAAAAACATAA12.564102564102564No Hit
GTTCCGATCCTTTTTGTTATTATTATGTTTATTGTTTTATTTTTTATTTATAATGAAGTGTAAGACGACAGCGAA12.564102564102564No Hit
CTAAAAATAAATATTTATTATTTTATTTTTTATTTTTTTTTCAAATAAAGAGGTAATTAATAAAAGAAGAAGTTT12.564102564102564No Hit
GGTGAACATCATCAAGAACGATGGCACCGTCATCCACTTCAACAATCCGAAGGCCCAGGCCTCGCTGGCGACGAT12.564102564102564No Hit
GTGCTCTTGCGATCTGTTTTTTTTTTTTTTTTTTTTTTATTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT12.564102564102564No Hit
GCAGTGGGGAATATTGGACAATGGGCGAAAGCCTGATCCAGCAATGCCGCGTGAGCTGTCTCTTATACACATCTG12.564102564102564No Hit
AATTGGGTATTTGTTTTTGATTTATGATATAATATTTAGTAATTGATTTGTGTTTAGTTATTATTTAGTGTTTCG12.564102564102564No Hit
CTTCCGATCTCCAAGGGGCCGATATTTTTATATTTTTTTTTTTTTTTTATTTATTTTTTTTTTTTATTATTTTTA12.564102564102564No Hit

[WARN]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.2)