FastQCFastQC Report
Mon 14 May 2018
H27VGAFXY_n01_zt14wtlarvs94.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH27VGAFXY_n01_zt14wtlarvs94.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences45
Sequences flagged as poor quality0
Sequence length75
%GC27

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA613.333333333333334No Hit
GCTATACAATAAATAAACCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAATGTTAATTTTAAAA12.2222222222222223No Hit
ACCTCATGCTGCATAGCCGGCGCTGTCTTTCTACGATTCTCCCACCTTAAATGAGAGCAAACAGTAATACACCAC12.2222222222222223No Hit
CATCTAAGGAAGGCAGCAGGCGCGTAAATTACCCACTCCCAGCTCGGGGAGGTAGTGACGAAAAATAACAATACA12.2222222222222223No Hit
AGTTCTAACCATAAACGATGCCAGCTAGCAATTGGGTGTAGCTACTTTTATGGCTCTCTCAGTCGCTTCCCGGGG12.2222222222222223No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTTTAATTAGTATGT12.2222222222222223No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATG12.2222222222222223No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAAAAAAAAAAAA12.2222222222222223No Hit
CCCCGGCGGCCCTCCACGGCACCGCGCGGCGGCCTCTTGCCGCGCTTCGCGACGCCCGCCCGCAAGGCCCTGTCT12.2222222222222223No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAAAAAAAAAAAAAA12.2222222222222223No Hit
AAACAGTGATGGCTGTGATCTTCAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAGCAAAATGAAAATTAAA12.2222222222222223No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAAAAACACACGAAAAAAAAAAATAAA12.2222222222222223No Hit
AACTGGGTGTAGCTACTTTTATGGCTCTCTCAGTCGCTTCCCGGGAAACCAAAGCTTTTGGGCTCCGGGGGCTGT12.2222222222222223No Hit
GTCTCAAAGATTAAGCCATGCATGTCTAAGTACACACGCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCG12.2222222222222223No Hit
AATTAAAGTTGTTGCGGTTAAAACGTTCGTAGTTGAACTTGTGCTTCATACGGGTAGTACAACTTACAATTGTGG12.2222222222222223No Hit
TAAAGGTATAGTACTAACCAAAATTGTAAGGAATACTACCCGTATGAAGCACAAGTTAAACAACGAACTTTTTAA12.2222222222222223No Hit
ACGTTTTAACCGCAACAACTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCC12.2222222222222223No Hit
CAAAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCACCCAGAGAAAAAAAAAAAAAAAAGAG12.2222222222222223No Hit
CCTTAGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTACCCGTTACACGTTGCAACCA12.2222222222222223No Hit
TCGTTATATTGGTTGAACTCTAGATAACATGCAGATCGTATGGTCTTGTACCGACGACAGATCTTTCAAATGTCT12.2222222222222223No Hit
CTCCAACTGCCCTATGTGTTCAGGCAGAGGTCGCCGGACATTACTCCAGTTTCTTTCGAGTTTCCCCCGGACTAG12.2222222222222223No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAAAAACCTGCATTAGTAAAATTAAAATAGTGTTAAT12.2222222222222223No Hit
AGCCTGCTTTAAGCACTCTAATTTGTTCAAAGTAATAGTACCGGCCCACAATAACACTCGTTTAAGAGCACTAAT12.2222222222222223No Hit
ATATTTGAGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACGAACTAAGAACGGCCATGCACCACCA12.2222222222222223No Hit
GCTCACGGTTGTTGGGCAAATCGTAGTTGATGACCAGCGACACCTGCTGTACATCGATACCCCGAGCCCACGAGA12.2222222222222223No Hit
AAAAAAAAAGATAGAAAGAGAAAAAAACACAAAAAAAAAAAAAAAAAAAAAAAAAACAAAAGAATACCAAAACAT12.2222222222222223No Hit
CTCCCATCATCAGCCATGGCACCGGTACATAGCCGATCGAGAACATGATGATGAACAGTCACAGACTGGCCACTG12.2222222222222223No Hit
GGCTTACACCGGTTTGAACTCAGATCATGTAAGAATTTAAAAGTCGAACAGACTTAAAATTTGAACGGCTACACC12.2222222222222223No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACACAAAAACACAAGTTAAACAAAAAAAATGCAGG12.2222222222222223No Hit
AAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGCACACACAAAAACACATCTCCAAGCCAAAGAGACA12.2222222222222223No Hit
TGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACTGTTAACGATCTAAGGAACCATAACTGATATAATGAG12.2222222222222223No Hit
ATACACATCTCCGAGCCCACGAGACTGCAGCTAATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAGGGGGGGG12.2222222222222223RNA PCR Primer, Index 29 (96% over 30bp)
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCAAGACAGCCAATTATAGTAAAAAAAGAAAATAA12.2222222222222223No Hit
AACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATATGACCAAAATAGTAGAAAAAAAAAGAACCCAGGATGAAGA12.2222222222222223No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAATTAAAAAAAAAAAAAAAAAAAGAAA12.2222222222222223No Hit
TCTAAGGGCATCACAGACCTGTTATTGCTCAATCTCATTATTGCTAGACGCAATTTGTCCATTTAAGAAGCTAGT12.2222222222222223No Hit
ACGAATACCTGTACCACAAAAAAAGACGTAGAACACACCAGTACTTGACGTCGCCTGGCACATTTATACTAATAT12.2222222222222223No Hit
AACATGAACCTTATGGGACATGTGCTTTTATTAGGCTAAAACCAAGCGATCGCAAGATCGTTATATTGGTTGAAC12.2222222222222223No Hit
TCGTAATACTAATGCCCCCAAACTGCTTCTATTAATCATTACCTCTTGATCTGAAAAACCAAAGAAAGCAGAACA12.2222222222222223No Hit
CTATTAATCATTACCTCTTGATCTGAAAACCAATGAAAGCAGAACAGAGGTCTTATTTCATTATCCCATGCACAG12.2222222222222223No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers