FastQCFastQC Report
Mon 14 May 2018
H27VGAFXY_n01_zt14wtlarvs58.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH27VGAFXY_n01_zt14wtlarvs58.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences33
Sequences flagged as poor quality0
Sequence length75
%GC39

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CAATCGGTTATTCAATTTTCTAAACAAACTCCCCCTTCTTCGGCCTTTCTCTTATACACATCTCCGAGCCAACCA13.0303030303030303No Hit
AGATTACCCAGGCCTCTCGGCCAAGGTGAAAACTCGCTGGCTCAGTCAGTGTAGCGCGCGTGCGGCCCAGAACAT13.0303030303030303No Hit
GTTTTAGCCTAATAAAAGCACATGTCCCATAAGGTTCATGTTTTAATTGCATGTATTAGCTCTAGAATCTGTCTC13.0303030303030303No Hit
AAAAAGAAAGAACTGTCCTCTTAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAAACAAAAAAAAATAA13.0303030303030303No Hit
GTCGTTAGCTCAGTACCACACAGGTCATTTCACGTACGGGGCTATCCCCCACTATGGCCAGTCTTTCCAAACTGT13.0303030303030303No Hit
CCACAAACAAAAAGTAAGATCACACAAATGACAAATATTTCACATCCCAAAAAAAAAAAAAAAAAAAAAAAAAAA13.0303030303030303No Hit
ATAACGATCTTGCGATCGCTTGGTTTTAGCCTAATAAAAGCACATGTCCCATAAGGTTCATGTTTTAATTGCATG13.0303030303030303No Hit
ATCCACTACCGAAAAAAAAAAAAAAAAAAAAAACAACTCCAAATACAAAGAAATCCAACCAACGACGGCCATCGA13.0303030303030303No Hit
CCCACATAGACTATGACCCAAAGGTGGTCGAACAGAAGGAGCAGGCCCAGCCTGCCTGCCTGCCCTGTCTCTTAT13.0303030303030303No Hit
CTCATCTTTTGTTTTCATTTTATGTGGCGAAAGCGAACATAAATGCGTCGAGAACACAAAGCCCCAGTCAAGATC13.0303030303030303No Hit
CTCCAGTAGTATTCACCCACCGCGGCCTTGGCCGGGCTAAGCAACGCAAGCCCCTCGGCGACGCGGGCGCGGGTT13.0303030303030303No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCCACAACCCCCCCCCAGACCGGCAAAACCAGTAGAGGCGGTTAA13.0303030303030303No Hit
GATCGGAAGAGCACACGTCTCCCTGCTCAGATCGGAAGAGCACACGTCTCCCTGCTCAGATCGGAAGCTGTCTCT13.0303030303030303Illumina Multiplexing PCR Primer 2.01 (95% over 21bp)
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA13.0303030303030303No Hit
GTACCATCGCCGGTTCAGGGACTGGATGCCTATCCTCTGGGCTCCTCGGCCTTCATGCTCCACTGGAAGAAGCCG13.0303030303030303No Hit
GAACTAAAGATCACAAATCTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAGTTGTATATTAA13.0303030303030303No Hit
GAACACACGAATTAAAAGTGAAACCGCAAAAGGCTCATTATATCAGTTATGGTTCCTTAGATCGTTAACAGTTAC13.0303030303030303No Hit
GTGCTCTTCCGATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGGGGGGGGGGGGGGGGGGGGGGGGG13.0303030303030303No Hit
GCATAATGATGGCCAGGCTGTCTCCACCCGAGACTCAGTGAAATTGAAATCGCCGTGAAGATGCGGCTATCTCTT13.0303030303030303No Hit
GAGCAATACAAAACGTATTGTTCTTCCAAACAGGAAGGTTTTTTTTCGTTTTCCACAAAGTATTCAGTGCAGTGC13.0303030303030303No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAGCAATGCAAGTCAAACGAAACACGAAAAAAAAGTGAAACAGCAAAAG13.0303030303030303No Hit
CTACCTGACCCCACAATAACCCACAAAACAAAAACAAGCGCCGATCCCATGTGACTCACGACGCGATTCGCTTGA13.0303030303030303No Hit
GAAGCAGAGTGTCCAGGGAACACTTGTAAGCAGCATGGCTGATGTGGACAAGACGCTTGACTTTGCGAAGCGGGG13.0303030303030303No Hit
GTCAGGATCAGCAGCCGCTCGTTCCAGGCGTGCTCGCGCAGCCAGGCGGTCAGGCGCCCGCCCTTGTCGCCCCTC13.0303030303030303No Hit
ATGCAGGCTCGACCGCCTTGCCGATCATGTCTTTCGGCCCCGGTGGCACGGACATTGCCATTGAGGATCCCGACA13.0303030303030303No Hit
CCCCATGAAATATCCGAATAGCCAAACACACTACAGCTCTTAAATTATGACCACAAATACATTAAAAAAAACAGC13.0303030303030303No Hit
ATATAAACCTAATAAAACAACATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAAACCTCACACTTAAAAAA13.0303030303030303No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACA13.0303030303030303No Hit
GTGCTGCTGTTGGTGATGGTGGTGCTGCTGCTGCTGGTGTTGTTCGTGTCTGCCCGGCTGGTATTCGGGGTCTTG13.0303030303030303No Hit
GGTAAACACTATGATTTCATTATCCTAATGTGATAGATGAAGAAGCTGAGAGGCTAAGTAATTTGCCCAAGGTCA13.0303030303030303No Hit
CAAAAATTAAGCTCATCCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACACCAAATCAAAAATAAAAAAAAA13.0303030303030303No Hit
AAACAAAACACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCCACACACAAATACAAATAAAAAA13.0303030303030303No Hit
GAGCACACGTCTCAGATCGGAAGAGCACACGTCTCAGATCGGAAGATCACACGAGTCCGCTCCGAAGAGCAAAAG13.0303030303030303Illumina Multiplexing PCR Primer 2.01 (95% over 23bp)

[WARN]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers