Module Section Sample Name Source FastQC all_sections H23Y2DMX2_n01_CITE-seq_test_GEX_PI2 /scratch/gencore/GENEFLOW/work/nf/ec/f5fd06298572f5d1ca9d476c71f28f/merged/H23Y2DMX2_n01_CITE-seq_test_GEX_PI2_fastqc.zip FastQC all_sections H23Y2DMX2_n01_CITE-seq_test_BCells_GD3 /scratch/gencore/GENEFLOW/work/nf/ec/f5fd06298572f5d1ca9d476c71f28f/merged/H23Y2DMX2_n01_CITE-seq_test_BCells_GD3_fastqc.zip FastQC all_sections H23Y2DMX2_n01_CITE-seq_test_BCells_C1 /scratch/gencore/GENEFLOW/work/nf/ec/f5fd06298572f5d1ca9d476c71f28f/merged/H23Y2DMX2_n01_CITE-seq_test_BCells_C1_fastqc.zip FastQC all_sections H23Y2DMX2_n01_CITE-seq_test_BCells_PI1 /scratch/gencore/GENEFLOW/work/nf/ec/f5fd06298572f5d1ca9d476c71f28f/merged/H23Y2DMX2_n01_CITE-seq_test_BCells_PI1_fastqc.zip FastQC all_sections H23Y2DMX2_n01_CITE-seq_test_BCells_PI3 /scratch/gencore/GENEFLOW/work/nf/ec/f5fd06298572f5d1ca9d476c71f28f/merged/H23Y2DMX2_n01_CITE-seq_test_BCells_PI3_fastqc.zip FastQC all_sections H23Y2DMX2_n01_CITE-seq_test_TCells_PI1 /scratch/gencore/GENEFLOW/work/nf/ec/f5fd06298572f5d1ca9d476c71f28f/merged/H23Y2DMX2_n01_CITE-seq_test_TCells_PI1_fastqc.zip FastQC all_sections H23Y2DMX2_n02_CITE-seq_test_TCells_GD3 /scratch/gencore/GENEFLOW/work/nf/ec/f5fd06298572f5d1ca9d476c71f28f/merged/H23Y2DMX2_n02_CITE-seq_test_TCells_GD3_fastqc.zip FastQC all_sections H23Y2DMX2_n01_CITE-seq_test_TCells_GD3 /scratch/gencore/GENEFLOW/work/nf/ec/f5fd06298572f5d1ca9d476c71f28f/merged/H23Y2DMX2_n01_CITE-seq_test_TCells_GD3_fastqc.zip FastQC all_sections H23Y2DMX2_n01_CITE-seq_test_BCells_GD1 /scratch/gencore/GENEFLOW/work/nf/ec/f5fd06298572f5d1ca9d476c71f28f/merged/H23Y2DMX2_n01_CITE-seq_test_BCells_GD1_fastqc.zip FastQC all_sections H23Y2DMX2_n02_CITE-seq_test_GEX_PI2 /scratch/gencore/GENEFLOW/work/nf/ec/f5fd06298572f5d1ca9d476c71f28f/merged/H23Y2DMX2_n02_CITE-seq_test_GEX_PI2_fastqc.zip FastQC all_sections H23Y2DMX2_n02_CITE-seq_test_BCells_C2 /scratch/gencore/GENEFLOW/work/nf/ec/f5fd06298572f5d1ca9d476c71f28f/merged/H23Y2DMX2_n02_CITE-seq_test_BCells_C2_fastqc.zip FastQC all_sections H23Y2DMX2_n02_CITE-seq_test_BCells_PI3 /scratch/gencore/GENEFLOW/work/nf/ec/f5fd06298572f5d1ca9d476c71f28f/merged/H23Y2DMX2_n02_CITE-seq_test_BCells_PI3_fastqc.zip FastQC all_sections H23Y2DMX2_n02_CITE-seq_test_GEX_GD1 /scratch/gencore/GENEFLOW/work/nf/ec/f5fd06298572f5d1ca9d476c71f28f/merged/H23Y2DMX2_n02_CITE-seq_test_GEX_GD1_fastqc.zip FastQC all_sections H23Y2DMX2_n01_CITE-seq_test_TCells_GD2 /scratch/gencore/GENEFLOW/work/nf/ec/f5fd06298572f5d1ca9d476c71f28f/merged/H23Y2DMX2_n01_CITE-seq_test_TCells_GD2_fastqc.zip FastQC all_sections H23Y2DMX2_n02_CITE-seq_test_TCells_GD2 /scratch/gencore/GENEFLOW/work/nf/ec/f5fd06298572f5d1ca9d476c71f28f/merged/H23Y2DMX2_n02_CITE-seq_test_TCells_GD2_fastqc.zip FastQC all_sections H23Y2DMX2_n02_CITE-seq_test_GEX_GD3 /scratch/gencore/GENEFLOW/work/nf/ec/f5fd06298572f5d1ca9d476c71f28f/merged/H23Y2DMX2_n02_CITE-seq_test_GEX_GD3_fastqc.zip FastQC all_sections H23Y2DMX2_n01_CITE-seq_test_GEX_PI3 /scratch/gencore/GENEFLOW/work/nf/ec/f5fd06298572f5d1ca9d476c71f28f/merged/H23Y2DMX2_n01_CITE-seq_test_GEX_PI3_fastqc.zip FastQC all_sections H23Y2DMX2_n02_CITE-seq_test_TCells_GD1 /scratch/gencore/GENEFLOW/work/nf/ec/f5fd06298572f5d1ca9d476c71f28f/merged/H23Y2DMX2_n02_CITE-seq_test_TCells_GD1_fastqc.zip FastQC all_sections H23Y2DMX2_n01_CITE-seq_test_GEX_C1 /scratch/gencore/GENEFLOW/work/nf/ec/f5fd06298572f5d1ca9d476c71f28f/merged/H23Y2DMX2_n01_CITE-seq_test_GEX_C1_fastqc.zip FastQC all_sections H23Y2DMX2_n01_CITE-seq_test_TCells_C2 /scratch/gencore/GENEFLOW/work/nf/ec/f5fd06298572f5d1ca9d476c71f28f/merged/H23Y2DMX2_n01_CITE-seq_test_TCells_C2_fastqc.zip FastQC all_sections H23Y2DMX2_n02_CITE-seq_test_GEX_PI1 /scratch/gencore/GENEFLOW/work/nf/ec/f5fd06298572f5d1ca9d476c71f28f/merged/H23Y2DMX2_n02_CITE-seq_test_GEX_PI1_fastqc.zip FastQC all_sections H23Y2DMX2_n01_CITE-seq_test_GEX_PI1 /scratch/gencore/GENEFLOW/work/nf/ec/f5fd06298572f5d1ca9d476c71f28f/merged/H23Y2DMX2_n01_CITE-seq_test_GEX_PI1_fastqc.zip FastQC all_sections H23Y2DMX2_n02_CITE-seq_test_GEX_C1 /scratch/gencore/GENEFLOW/work/nf/ec/f5fd06298572f5d1ca9d476c71f28f/merged/H23Y2DMX2_n02_CITE-seq_test_GEX_C1_fastqc.zip FastQC all_sections H23Y2DMX2_n02_CITE-seq_test_TCells_C1 /scratch/gencore/GENEFLOW/work/nf/ec/f5fd06298572f5d1ca9d476c71f28f/merged/H23Y2DMX2_n02_CITE-seq_test_TCells_C1_fastqc.zip FastQC all_sections H23Y2DMX2_n02_CITE-seq_test_BCells_GD2 /scratch/gencore/GENEFLOW/work/nf/ec/f5fd06298572f5d1ca9d476c71f28f/merged/H23Y2DMX2_n02_CITE-seq_test_BCells_GD2_fastqc.zip FastQC all_sections H23Y2DMX2_n01_CITE-seq_test_GEX_GD2 /scratch/gencore/GENEFLOW/work/nf/ec/f5fd06298572f5d1ca9d476c71f28f/merged/H23Y2DMX2_n01_CITE-seq_test_GEX_GD2_fastqc.zip FastQC all_sections H23Y2DMX2_n02_CITE-seq_test_GEX_GD2 /scratch/gencore/GENEFLOW/work/nf/ec/f5fd06298572f5d1ca9d476c71f28f/merged/H23Y2DMX2_n02_CITE-seq_test_GEX_GD2_fastqc.zip FastQC all_sections H23Y2DMX2_n02_CITE-seq_test_BCells_PI1 /scratch/gencore/GENEFLOW/work/nf/ec/f5fd06298572f5d1ca9d476c71f28f/merged/H23Y2DMX2_n02_CITE-seq_test_BCells_PI1_fastqc.zip FastQC all_sections H23Y2DMX2_n02_CITE-seq_test_BCells_C1 /scratch/gencore/GENEFLOW/work/nf/ec/f5fd06298572f5d1ca9d476c71f28f/merged/H23Y2DMX2_n02_CITE-seq_test_BCells_C1_fastqc.zip FastQC all_sections H23Y2DMX2_n01_CITE-seq_test_BCells_GD2 /scratch/gencore/GENEFLOW/work/nf/ec/f5fd06298572f5d1ca9d476c71f28f/merged/H23Y2DMX2_n01_CITE-seq_test_BCells_GD2_fastqc.zip FastQC all_sections H23Y2DMX2_n01_CITE-seq_test_TCells_PI3 /scratch/gencore/GENEFLOW/work/nf/ec/f5fd06298572f5d1ca9d476c71f28f/merged/H23Y2DMX2_n01_CITE-seq_test_TCells_PI3_fastqc.zip FastQC all_sections H23Y2DMX2_n02_CITE-seq_test_TCells_C2 /scratch/gencore/GENEFLOW/work/nf/ec/f5fd06298572f5d1ca9d476c71f28f/merged/H23Y2DMX2_n02_CITE-seq_test_TCells_C2_fastqc.zip FastQC all_sections H23Y2DMX2_n02_undetermined /scratch/gencore/GENEFLOW/work/nf/ec/f5fd06298572f5d1ca9d476c71f28f/merged/H23Y2DMX2_n02_undetermined_fastqc.zip FastQC all_sections H23Y2DMX2_n01_CITE-seq_test_TCells_GD1 /scratch/gencore/GENEFLOW/work/nf/ec/f5fd06298572f5d1ca9d476c71f28f/merged/H23Y2DMX2_n01_CITE-seq_test_TCells_GD1_fastqc.zip FastQC all_sections H23Y2DMX2_n02_CITE-seq_test_TCells_PI1 /scratch/gencore/GENEFLOW/work/nf/ec/f5fd06298572f5d1ca9d476c71f28f/merged/H23Y2DMX2_n02_CITE-seq_test_TCells_PI1_fastqc.zip FastQC all_sections H23Y2DMX2_n01_CITE-seq_test_TCells_PI2 /scratch/gencore/GENEFLOW/work/nf/ec/f5fd06298572f5d1ca9d476c71f28f/merged/H23Y2DMX2_n01_CITE-seq_test_TCells_PI2_fastqc.zip FastQC all_sections H23Y2DMX2_n01_CITE-seq_test_BCells_PI2 /scratch/gencore/GENEFLOW/work/nf/ec/f5fd06298572f5d1ca9d476c71f28f/merged/H23Y2DMX2_n01_CITE-seq_test_BCells_PI2_fastqc.zip FastQC all_sections H23Y2DMX2_n02_CITE-seq_test_BCells_PI2 /scratch/gencore/GENEFLOW/work/nf/ec/f5fd06298572f5d1ca9d476c71f28f/merged/H23Y2DMX2_n02_CITE-seq_test_BCells_PI2_fastqc.zip FastQC all_sections H23Y2DMX2_n02_CITE-seq_test_GEX_C2 /scratch/gencore/GENEFLOW/work/nf/ec/f5fd06298572f5d1ca9d476c71f28f/merged/H23Y2DMX2_n02_CITE-seq_test_GEX_C2_fastqc.zip FastQC all_sections H23Y2DMX2_n01_CITE-seq_test_GEX_GD3 /scratch/gencore/GENEFLOW/work/nf/ec/f5fd06298572f5d1ca9d476c71f28f/merged/H23Y2DMX2_n01_CITE-seq_test_GEX_GD3_fastqc.zip FastQC all_sections H23Y2DMX2_n01_CITE-seq_test_GEX_C2 /scratch/gencore/GENEFLOW/work/nf/ec/f5fd06298572f5d1ca9d476c71f28f/merged/H23Y2DMX2_n01_CITE-seq_test_GEX_C2_fastqc.zip FastQC all_sections H23Y2DMX2_n01_CITE-seq_test_TCells_C1 /scratch/gencore/GENEFLOW/work/nf/ec/f5fd06298572f5d1ca9d476c71f28f/merged/H23Y2DMX2_n01_CITE-seq_test_TCells_C1_fastqc.zip FastQC all_sections H23Y2DMX2_n02_CITE-seq_test_GEX_PI3 /scratch/gencore/GENEFLOW/work/nf/ec/f5fd06298572f5d1ca9d476c71f28f/merged/H23Y2DMX2_n02_CITE-seq_test_GEX_PI3_fastqc.zip FastQC all_sections H23Y2DMX2_n01_CITE-seq_test_GEX_GD1 /scratch/gencore/GENEFLOW/work/nf/ec/f5fd06298572f5d1ca9d476c71f28f/merged/H23Y2DMX2_n01_CITE-seq_test_GEX_GD1_fastqc.zip FastQC all_sections H23Y2DMX2_n02_CITE-seq_test_TCells_PI3 /scratch/gencore/GENEFLOW/work/nf/ec/f5fd06298572f5d1ca9d476c71f28f/merged/H23Y2DMX2_n02_CITE-seq_test_TCells_PI3_fastqc.zip FastQC all_sections H23Y2DMX2_n02_CITE-seq_test_BCells_GD1 /scratch/gencore/GENEFLOW/work/nf/ec/f5fd06298572f5d1ca9d476c71f28f/merged/H23Y2DMX2_n02_CITE-seq_test_BCells_GD1_fastqc.zip FastQC all_sections H23Y2DMX2_n01_undetermined /scratch/gencore/GENEFLOW/work/nf/ec/f5fd06298572f5d1ca9d476c71f28f/merged/H23Y2DMX2_n01_undetermined_fastqc.zip FastQC all_sections H23Y2DMX2_n01_CITE-seq_test_BCells_C2 /scratch/gencore/GENEFLOW/work/nf/ec/f5fd06298572f5d1ca9d476c71f28f/merged/H23Y2DMX2_n01_CITE-seq_test_BCells_C2_fastqc.zip FastQC all_sections H23Y2DMX2_n02_CITE-seq_test_TCells_PI2 /scratch/gencore/GENEFLOW/work/nf/ec/f5fd06298572f5d1ca9d476c71f28f/merged/H23Y2DMX2_n02_CITE-seq_test_TCells_PI2_fastqc.zip FastQC all_sections H23Y2DMX2_n02_CITE-seq_test_BCells_GD3 /scratch/gencore/GENEFLOW/work/nf/ec/f5fd06298572f5d1ca9d476c71f28f/merged/H23Y2DMX2_n02_CITE-seq_test_BCells_GD3_fastqc.zip