H23V3BCXX l02n01 kb2_4_80.3410000000b20b.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23V3BCXX l02n01 kb2_4_80.3410000000b20b.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	707810
Sequences flagged as poor quality	0
Sequence length	51
%GC	40

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACTGTTATACATCTCGTATGCCGTC	13555	1.9150619516536924	RNA PCR Primer, Index 39 (95% over 21bp)
TCTTATACACATCTCCGAGCCCACGAGACTGTTATACATCTCGTATGCCGT	4387	0.6197990986281628	No Hit
AAAAAGTACTCTGCGTTGATACCTGTCTCTTATACACATCTCCGAGCCCAC	3466	0.4896794337463444	No Hit
AAAAAGTACTCTGCGTTGATACCCTGTCTCTTATACACATCTCCGAGCCCA	1367	0.1931309249657394	No Hit
AAAGTACTCTGCGTTGATACCTGTCTCTTATACACATCTCCGAGCCCACGA	1340	0.1893163419561747	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACTGTTATACATCTCGTATGCCG	1320	0.18649072491205268	No Hit
GTCATAAGACAGGTATCGTAAATTTATTTACGAGGCAAACCGGGAGAAGTG	859	0.12136025204504033	No Hit
AAAAAGTACTCTGCGTTGATACTGTCTCTTATACACATCTCCGAGCCCACG	746	0.10539551574575098	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGCCGTC	1470	0.0	43.008583	45
ATGCCGT	1890	0.0	33.57016	44
CTCGTAT	1995	0.0	31.916088	39
GTTATAC	2005	0.0	31.869125	30
TCGTATG	2005	0.0	31.756908	40
CATCTCG	2005	0.0	31.644693	36
TATGCCG	2015	0.0	31.599308	43
CGAGACT	2035	0.0	31.509869	23
ACGAGAC	2050	0.0	31.389063	22
ATCTCGT	2035	0.0	31.178186	37
CGTATGC	2040	0.0	31.10177	41
CACGAGA	2075	0.0	31.010881	21
CCACGAG	2085	0.0	30.862148	20
TCTCGTA	2100	0.0	30.213148	38
CCTCAGT	30	0.0051468853	29.998873	22
AGAGCGC	30	0.0051468853	29.998873	39
ACTGTTA	2140	0.0	29.963825	27
TGTTATA	2165	0.0	29.825668	29
GTATGCC	2165	0.0	29.5139	42
GACTGTT	2195	0.0	29.213022	26