FastQCFastQC Report
Wed 6 May 2015
H23V3BCXX l02n01 kb2_3_88.3410000000ab8d.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH23V3BCXX l02n01 kb2_3_88.3410000000ab8d.fastq.gz
File typeConventional base calls
EncodingIllumina 1.3
Total Sequences13
Sequences flagged as poor quality0
Sequence length51
%GC41

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GAGGTAAAGAAGTCGTTCAACAGCCCAACTACTGTCTCTTATACACATCTC17.6923076923076925No Hit
ATTGTACTTGTTCTTGTCTTGGTTGATAAGACGGATCCTTGCCCTGTAGTC17.6923076923076925No Hit
TTACTTATGCCTACATTTTCTTTTCTATAAGCTCCACCAAGCCTCACAGCT17.6923076923076925No Hit
CTCATATCGTTGATACTTCTTCACAAAGTGAAGGTAATTCCTACGAACAAT17.6923076923076925No Hit
AGCTGAGTTTGATCAGATCGTTGAAGCTTGTGAGGTTAATGGTGTTCAATT17.6923076923076925No Hit
TCTTCACACTGAATACTAAGTGTTCACCGTACTCCTGTCTCTTATACACAT17.6923076923076925No Hit
GCCTTTCACCGTCACTTTCTGCTCCTTTATATCTGTCTCTTATACACATCT17.6923076923076925No Hit
TAATATACGTGTCTTTCCCAAGATGATTCAATCTCTCTTTCCATTACCACA17.6923076923076925No Hit
CCGTCTACTGTCTTTTTCTTCAATGGGCAGCATATGAAAGTGGATTATGGG17.6923076923076925No Hit
GGATGATTCCATTCCATTGCATTCCGTTCCATTACATTCCCCCTGTCTCTT17.6923076923076925No Hit
CACTTTGGCCAGTGCTCGTTTTCGTATTAAAAAGAAACAGCGCGAAGCTGC17.6923076923076925No Hit
GTCGAAGACAGTGAGGTTCAATGTGTTGAAGGTGATACCAGCTGGGTCTTC17.6923076923076925No Hit
TTTTCTGCGTTGATACCACCCGTACTCTGCGTTGATACCCTGTCTCTTATA17.6923076923076925No Hit

[FAIL]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.2)