FastQCFastQC Report
Wed 6 May 2015
H23V3BCXX l02n01 kb2_3_85.3410000000ab4a.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH23V3BCXX l02n01 kb2_3_85.3410000000ab4a.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21
Sequences flagged as poor quality0
Sequence length51
%GC43

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCTCGTCTCAGCATCTACGACCCACAAGTCACTGAAGAGCAGATCCAAAG14.761904761904762No Hit
GACAGCTAAGAAATCTAGGGTTAAGTGTTTCATCAAGCTTGTTACTGTCTC14.761904761904762No Hit
GTCATGAACTCTACAAGCCTAGAGAGTGAAAGAGGAGCTTTGTTGACTTTG14.761904761904762No Hit
GTCTTTAGTGAGAGTTTCCTACTACAGAAATTGAATAGCTGTCTCTTATAC14.761904761904762No Hit
TTGCAAAGACCAGCCCATTCGCCGAGTGTTTTGGCACTAGGAACAGTAAGC14.761904761904762No Hit
GACAGCTTCAGTCTGTTTTACATCACCCAACACTTTAGTGAAGTTTGGTTG14.761904761904762No Hit
GCTTAGGACACTCAGCGTAGACACGCTCAAGAGCCTCGACTTGCTCAGCTG14.761904761904762No Hit
ACATGTTTCAAAGCTGAAGCATTCACTATAGTCCCAAATCTATATGCCTTG14.761904761904762No Hit
TGTTGGAGCTGTGACAATTGATGCTGCTGTTGCTGTTGCTGCTGGTGTTGT14.761904761904762No Hit
GTTAAAGAAAATACAAAATGGACCCCAACAGCAAAAACCTGTCTCTTATAC14.761904761904762No Hit
CCAGGTTGTTAGACATCAGTCCCTCGATGTTCATCCTAGTCCGACTTTTTC14.761904761904762No Hit
GTATCCCACCTGGGGAGTACGCACGCAAGTGTGAAACTCAAAGGAATTGAC14.761904761904762No Hit
GTGGGAAAGGATGTGGAGTTGCTGAGACAACCAGGAGGTTGGCTTAGAAGC14.761904761904762No Hit
GCGGTTATGAGTACGACCGGGCGTGAGCGGCACTCGGTCCTCCGGATTTTC14.761904761904762No Hit
CGCTTAAGCGCCATCCATTTTCGGGGCTAGTTGATTCGGCAGGTGAGTTGT14.761904761904762No Hit
AAATATAACAGGCTGAAATATGCTTTATTGGTCAAATGCTGTCTCTTATAC14.761904761904762No Hit
ATTATGTTCAATGTCCCTTTGTGTTCCGTTGAGTTAAACACCAACGTGTAG14.761904761904762No Hit
CAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTCTATGGCCTCTCCCCGT14.761904761904762No Hit
GTATCAACGCAGAGTACGGGGGAGATATCAAAAAGAAGAGAAGACCAAAAA14.761904761904762No Hit
CATGAGGTATGTCTCCTCTTATGGAATTTTGATCAAGAAGTAAATACTGTA14.761904761904762No Hit
GATCTGAAACGATTAGCCATTTTTGTTGCAGATAGATTTTGATTGGAACCC14.761904761904762No Hit

[FAIL]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.2)