FastQCFastQC Report
Wed 6 May 2015
H23V3BCXX l02n01 kb2_3_61.3410000000a9a9.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH23V3BCXX l02n01 kb2_3_61.3410000000a9a9.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13
Sequences flagged as poor quality0
Sequence length51
%GC42

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTTTAGCCAAGAAACAGCGACAGAGAAAGTGAAAATTAAGATGTAAAATT17.6923076923076925No Hit
GTTCTACTTATGACATCAGGATTGTGAATGTGTTGATTGGAGCTTATGCTC17.6923076923076925No Hit
GAGTACGGGCAACATTAGTGGCTCAATCGTCGAGGTGAGCCAGCCAAACAA17.6923076923076925No Hit
GGCTAGCAATCCAGGACCTCCTTTCTCCATGGCTGAGCACAGGCATTCTGA17.6923076923076925No Hit
CCTCCTTAGCACCCAATTTTGCCAATTATCGCGCTTCCTTATGAAGTCACC17.6923076923076925No Hit
AGTTAAATCTACCATTTGACCATTAAATTTACCTGCTACAGCTTTCTTTCT17.6923076923076925No Hit
CCAAAGAAATCTAACATTAAGTCTTTGAAGAACACAAAGCATAATCTAGCA17.6923076923076925No Hit
CTGTAACACAACTCCTAAATAAGTTTCAAGCAAAATTATCCGGAAACTGCA17.6923076923076925No Hit
CGACCTATGAACCACATCTTAAACGTAGCGCTTTCTACCTCTTCTTCACTT17.6923076923076925No Hit
ATGATGATGAGGATGATGAAGAGTAAATCACCAATCAAGCCTTCTTTGTCT17.6923076923076925No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAA17.6923076923076925No Hit
ACCAGTGGCTGCTCGAGAGCCAGCTGCTGGCCGATGGTCCGGCGCTGGTGC17.6923076923076925No Hit
CTTCCATTGTTCGTCTTGTTCGTCCCACTCGTCCCGACAAGGCTCGTCGTC17.6923076923076925No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.2)