FastQCFastQC Report
Wed 6 May 2015
H23V3BCXX l02n01 kb2_2_83.3410000000a4ae.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH23V3BCXX l02n01 kb2_2_83.3410000000a4ae.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11
Sequences flagged as poor quality0
Sequence length51
%GC42

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTGTAAAACAGTTTCTACAGCTGCATTTGGGATGGAGAGGCCTACAATCC19.090909090909092No Hit
AAAAAAAAGTACTCTGCGTTGATACCTGTCTCTTATACACATCTCCGAGCC19.090909090909092No Hit
GGCTTGGCAGAATCAGCGGGGAAAGAAGACCCTGTTGAGCTTGACTCTAGT19.090909090909092No Hit
GAATAATGCTGTTCATATTCCGTATAATGCGAATGTTTCCAAATTGGTCTT19.090909090909092No Hit
GTAAGAATACAGTTGTGCTGTACCCGTACTCTGCGTTGATACCTGTCTCTT19.090909090909092No Hit
TCTGTAGAGAGATCGAGATCTTAAGAAGTGTTGATCATCCAAACGTTGTGA19.090909090909092No Hit
GTTTCAACTTGAGCTTCCTCTGTTTCTTCGATTGGTTTCTCTGTCTCTTCC19.090909090909092No Hit
GTCTTACCTGAAGCTGCACTTGGAGCTGACCGCTACCTCTCTTCTCTCACC19.090909090909092No Hit
ATACTGCATTGCTTGTTGCACCATGGATTGTACCTGTCTCTTATACACATC19.090909090909092No Hit
GTTATGTTGTATAAGCCAAAGCAAAAGGCTTTTGTGGATTGTAACTGTCTC19.090909090909092No Hit
AGATTGGGTTATGAATAATCGAAGTTTCAAGTTGCTTGACAGGAAGAATAT19.090909090909092No Hit

[FAIL]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.2)