FastQCFastQC Report
Wed 6 May 2015
H23V3BCXX l02n01 kb2_2_82.3410000000a491.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH23V3BCXX l02n01 kb2_2_82.3410000000a491.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11
Sequences flagged as poor quality0
Sequence length51
%GC42

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCCTCTTGGTGCCCAAAGCCCTGGTTATGGCTTTGCTCCAACGTCTCCTG19.090909090909092No Hit
AATGTATTCCGTTCCATTCCATTCCATTCCATTACCTGTCTCTTATACACA19.090909090909092No Hit
TTTTAAAGTCCTTTTCATCTTTACCTCGCGGTACTTGTTCGCTATCGGTCT19.090909090909092No Hit
GGTATCAACGCAGAGTACGGGGATCTAATCTCTAACTTCTCTCGCTAACTC19.090909090909092No Hit
CTCAACACCCTGACGGCGACTGCGCCTTCCAAGGCCTCTGCCGCCGCCGTG19.090909090909092No Hit
TGTTTTATTTGGCATCTGATCACTCACAGCAATCTTCTCAGATAAAAACAC19.090909090909092No Hit
TTCAATCTCTGACTTAACAGAATCAATCTCTGCTTGTGACTCAGAGAAAAT19.090909090909092No Hit
CCTCTATACTATTCTGTACCATTGTCTTGTAAATTGAGGATCTGTCTCTTA19.090909090909092No Hit
CTCCCTGAAAAGCATCAGCACAACACAACAACATATGAAAACACTCTTGAC19.090909090909092No Hit
ATTTGTGATTTGTCATCTCCGAAACGTTTCTCTCTTTAAAACTTTTTTTGA19.090909090909092No Hit
GAAACATGAGGATGTATCACAAGAAAAGGAAGAGTTAGAAGAGGAAGATGG19.090909090909092No Hit

[WARN]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.2)