H23V3BCXX l02n01 kb2_2_63.3410000000a35f.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23V3BCXX l02n01 kb2_2_63.3410000000a35f.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1222
Sequences flagged as poor quality	0
Sequence length	51
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACGACGCTATATCTCGTATGCCGTC	186	15.220949263502456	No Hit
TCTTATACACATCTCCGAGCCCACGAGACGACGCTATATCTCGTATGCCGT	8	0.6546644844517185	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACGACGCTATATCTCGTATGCCG	3	0.24549918166939444	No Hit
TCTTATACACATCTCCGAGCCCACGAGACTAGATCCTATCTCGTATGCCGT	2	0.16366612111292964	No Hit
CTTATACACATCTCCGAGCCCACGAGACGACGCTATATCTCGTATGACGTC	2	0.16366612111292964	No Hit
CTTATACACATCCCGAGCCCACGAGACGACGCTATATCTCGTATGCCGTCT	2	0.16366612111292964	Illumina PCR Primer Index 11 (95% over 21bp)
CTTATACACATATCCGAGCCCACGAGACGACGCTATATCTCGTATGCCGTC	2	0.16366612111292964	No Hit
CTTATACACATCTCCGAGCCCACGAGACGACGCTATATATCGTATGCCGTC	2	0.16366612111292964	No Hit
CTTATACACATCTCCAAGCCCACGAGACGACGCTATATCTCGTATGCCGTC	2	0.16366612111292964	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AGCCCAC	20	4.576611E-4	45.000004	17
GTATGCC	20	4.576611E-4	45.000004	42
CTATATC	20	4.576611E-4	45.000004	33
ACGCTAT	20	4.576611E-4	45.000004	30
ATCTCGT	20	4.576611E-4	45.000004	37
ATCTCCG	20	4.576611E-4	45.000004	10
CACATCT	20	4.576611E-4	45.000004	7
GCCCACG	20	4.576611E-4	45.000004	18
TATATCT	20	4.576611E-4	45.000004	34
TGCCGTC	20	4.576611E-4	45.000004	45
CCACGAG	20	4.576611E-4	45.000004	20
TATGCCG	20	4.576611E-4	45.000004	43
GAGCCCA	20	4.576611E-4	45.000004	16
CACGAGA	20	4.576611E-4	45.000004	21
CCCACGA	20	4.576611E-4	45.000004	19
CGCTATA	20	4.576611E-4	45.000004	31
ACATCTC	20	4.576611E-4	45.000004	8
GCTATAT	20	4.576611E-4	45.000004	32
TCTCGTA	20	4.576611E-4	45.000004	38
GACGCTA	20	4.576611E-4	45.000004	29