FastQCFastQC Report
Wed 6 May 2015
H23V3BCXX l02n01 kb2_2_6.34100000009f7f.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameH23V3BCXX l02n01 kb2_2_6.34100000009f7f.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences114
Sequences flagged as poor quality0
Sequence length51
%GC44

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTATGATACTGTCGAGAACGCTAAGAAGTTTGAGCCTAAGTCCAGACTTAT10.8771929824561403No Hit
ATACGGGCGAGAGACCGATAGCGAACAAGTACCGCGAGGTAAAGATGAAAA10.8771929824561403No Hit
TTTCACCCTCCTGTATCTGAAGATCTTCTAACAAAGATGGTGGTGGAGGTT10.8771929824561403No Hit
CCTTAAAACAAAAGCTGAGCTGGAACTGGTTCATCTCCTTATGTCATCGTG10.8771929824561403No Hit
AAAAAAGAGAGAGAAGAAAACAAAATCTGTTTCGTCTTCCACAAGATCAGA10.8771929824561403No Hit
GTCTTAATGTGTCAGCAGGATTTTTGTGTTTGCCTCTCTTTTTTTTCCGGA10.8771929824561403No Hit
GCTTAGAGATGGCGAAGAAGAGAATGTGGATACATATGGCTTGACCTCTCA10.8771929824561403No Hit
GCCTTCAGATGCAAGATTCTTCTTGTTCACGGTATTGTCTGTCTCTTATAC10.8771929824561403No Hit
CATAATATCAACGGTCATGATGAGAAACCAGAGGAGAAACTTGAAGATCTG10.8771929824561403No Hit
GTCTACTATCCAGCGAAACCACAGCCAAGGGAACGGGCTTGGCAGAATCAG10.8771929824561403No Hit
CTTATACACATCTCCGAGCCCACGAGACTAGATCCTATCTCGTATGCCGTC10.8771929824561403No Hit
GTATAGGGGCGAAAGACTAATCGAACCATCTAGTAGCTGGTTCCCTCCGAA10.8771929824561403No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCGGCTTTACACC10.8771929824561403No Hit
TCTTTGAAGCTTTCACATACTGTTGTACTTTCTCTTACTGCTGTGAATTTC10.8771929824561403No Hit
GTCTCATGCACACCTATCAATTTCTCCCACACAAAATATAACGGTGTAGAC10.8771929824561403No Hit
GAGTCATCCTTCAACAACATTAGGAACTGGATTCGTAATATCGAACAGCAT10.8771929824561403No Hit
TTGTTGCACGTATTAGCTCTAGAATTACTACGGTTATCCGAGTAGTAGTTA10.8771929824561403No Hit
ACTCCAGAGGATACGTTTCCAGAATTAAACAGATGGATCAAGAACTTGAAT10.8771929824561403No Hit
GGTGCTCTCGCGTTGGATGGAAAGCAGTTTGACTATAAAACCAACGAAAGA10.8771929824561403No Hit
CATCAAGATCATACACAACATCAGAAGATGAGTTTACAAAATACGAGAGAG10.8771929824561403No Hit
CTTCATTTGTGTTTGCCTTGTGGCATGGTGGTTATTTCATATGTGTTTGTT10.8771929824561403No Hit
GTTCCAATGATGCTCAAGGCTGGTTACCGCCATGTATATGTGAGCCGCAGC10.8771929824561403No Hit
CTATAAAAAGTTTGGTTGCTTTTCGTAAGGCTGTTGAACTTAATGTTAATC10.8771929824561403No Hit
ATCCAGACTAATACCAATCCAACCCATTTCATGAATAAAATGTGACCAATT10.8771929824561403No Hit
TCTTATACACATCTCCGAGCCCACGAGACGAATTGCTATCTCGTATGCCGT10.8771929824561403No Hit
GGACTATCACCTTCTTTGGTGCCCCTTTCCAAAGGACTTATGTCTGCAAAT10.8771929824561403No Hit
AGGCAGCTCTTTGCGCGATAAGGATCATCAGAAAAGTTCCGGATCTTTCTG10.8771929824561403No Hit
TTCTCAGGGACATTCTTTACTCAGAAATCAAGGCATGCAAAGATACAATCG10.8771929824561403No Hit
GCGGTGAACAAGTTCAATGTGATGCCTGATTCTATACCCGAGTGGGTTTTC10.8771929824561403No Hit
CTTATACACATCTCCGAGCCCACGAGACGAATTGCTATCTCGTCTGCCGTC10.8771929824561403No Hit
GGGGAAGAGGCGCTACGCTGCCCTCGGCCCGATCATCCAATTCCTGTCTCT10.8771929824561403No Hit
CCTTTCCAGGGGACTTGGGCCCGGTCCGTCGCTGAGGACGCTTCTCCAGAC10.8771929824561403No Hit
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCCGCGGTACC10.8771929824561403No Hit
CCTCATCAACCATGCATCTATCGCCATGAATCTTTATTACCTGTCTCTTAT10.8771929824561403No Hit
CTCCAGGTCTTGTCACCAAAAACCTTCCCCGATTGACAGAACGTTCCGCTA10.8771929824561403No Hit
TCTTTACCTCGCGGTACTTGTTCGCTATCGGTCTCTCGCCCGTATTTAGCC10.8771929824561403No Hit
ACTCGGGTGTCGGACCTGCCGCCCGTGTTCGTTTTCGTCGGACGATGTGCA10.8771929824561403No Hit
ATCACTCATGAAAATTCTCACTGAGAGAGGTTACATGTTCACCCTGTCTCT10.8771929824561403No Hit
AGATAACCAATGTCTCAACACCCCTAATGATTAAGTCGACTGTGTGTGATC10.8771929824561403No Hit
GTCTACGAGTCGGGTTGTTTGGGAATGCAGCCCCAATCGGGCGGTAAATTC10.8771929824561403No Hit
GCCGAGCGCCACCGCGTCGCGCACCTGCCGCTCGCCCGGCGCGACCTCGTC10.8771929824561403No Hit
TAATAATGGTATAATGATCCCGTACTCTGCGTTGATACCCTGTCTCTTATA10.8771929824561403No Hit
TACTTAGGCTTAGAGGGTGGTCCCCCTTTCTCGCGTAAAAGCGATCAGAAT10.8771929824561403No Hit
TATTAGGGAAAGGAGAGTGAGGGGAAGAGGCGCTACGCTGCCCTCGGCCCG10.8771929824561403No Hit
GCCTTACACCGACCACACGCTCGCAGCCTGGGGTCGCGATGGCGTCGAGCC10.8771929824561403No Hit
TTTCTGGATCGGTAAATAGCAAAGAAGTATTATCGACAGATTCTGTACGCT10.8771929824561403No Hit
GACTTGTGGCTAGGGGTGAAAGGCCAACCAAGATCGGATATAGCTGGTTTT10.8771929824561403No Hit
GAGCTTTAAAGAAGTCTGATGATAATGGAAAAGCAAAGAAGAAACCAAGAG10.8771929824561403No Hit
ATCTATAGCATATATAACGCCCTTGAAGTGGCAACTGTGGCATAATGTCCT10.8771929824561403No Hit
ACTCTGTTCTGATGTCTTATAGAGAACAAACTTGTACTCCTGTCTCTTATA10.8771929824561403No Hit
TCATTACTCCGATCCCGAAGGCCAACACAATAGGATCGAAATCCTATGATG10.8771929824561403No Hit
CATATTAGAATGGTTAACATACAACTTTACCTGTGCCTCTGCAGTATCTGT10.8771929824561403No Hit
CGCAAAAAAAAAAAAAAAAAAAAAAAAAAATTCCTCGCGTTTAAACCTGTC10.8771929824561403No Hit
GCTTAGAGGGTGGTCCCCCTTTCTCGCGTAAAAGCGATCAGAATTCGAACA10.8771929824561403No Hit
ATTGAGTAGCAAGAAGGTGAGATATGGAGCACGGTTCGTTCACGAATGTTA10.8771929824561403No Hit
CATGAACACTGATATTCTAGACTCGTGGGTTAGAGAGAACCAAGGCAAAAC10.8771929824561403No Hit
TCCTACCTATTTAAAGTTTGAGAATAGGTCGAGGGCGTTGCGCCCCCAATG10.8771929824561403No Hit
AGCCACGGAGCTTGGATACGGTTTCCCGATCGGAGATCCATGGATCACAGA10.8771929824561403No Hit
GTATTTCCTAATTTAGTAGAAAAACAGTTCGATACCTGTCTCTTATACACA10.8771929824561403No Hit
TTTTTTGCGTTGATACCACTGCCCGTACTCTGCGTTGATACTGTCTCTTAT10.8771929824561403No Hit
GGATATTTCCATTTGAGTCCATTCGATGATTGTTCCATTCGATTCTATTCG10.8771929824561403No Hit
GAGTACGGGCAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAGGTCCTA10.8771929824561403No Hit
GTATATAGCAATCCCCATCAATCAAACCATACGGAACCAAGAAAAACAGAG10.8771929824561403No Hit
ATTGCATCCATCAAATTTGCAAGCTTTGGAACTCCTTTAGGAACCTGCGGG10.8771929824561403No Hit
GTGTGAAGCCCTGGACATAAGGGGCATGATGACTTGACGTCGTCCCCACCT10.8771929824561403No Hit
CTCCCGGACTAAACGCGTGCCCCTTCGGAGCTGTCTCTTATACACATCTCC10.8771929824561403No Hit
GAACAAGCGTTTGATGTTTTCATCAATCATTAGTGATTTTTTTGCTGTTAT10.8771929824561403No Hit
CCCCGATCTGGCGCAGATGGGGGGCGCGCGACGGGATGGATGGTGCTGTCG10.8771929824561403No Hit
GGTGAAATACCACTCTGATTGTTCTGATTATCTCACTGTGGACCGTGATCC10.8771929824561403No Hit
CTTTTTTTCTGAGGTCTCTAGAGTATCTGTCTCCTGTCTCTTATACACATC10.8771929824561403No Hit
GTTCAATAATTCAAGAACTTAAGTCTAATCTGAGGAGAAACAAAAATCAAA10.8771929824561403No Hit
TAACAATACATTACAACACGGTTTGCGGAACTACTCCACAGTCTATCTTCT10.8771929824561403No Hit
CTACACGAGATTCCGGTCTTGATGAAGATAGAGATGGAGTATTGGTAGATG10.8771929824561403No Hit
CATTGAATGGTACACATAGGAGACGTTGTATTCCACATTGATTTGCTCATT10.8771929824561403No Hit
TCTTTCGGTGACTTAACATTACTCTCCCTTCTACTGATCATTGCCTTAGTA10.8771929824561403No Hit
CTTCATAGATAGCGTGGAGAAAATCCTCCATAGTGATCTTGATATTCTCCT10.8771929824561403No Hit
GTTTTTTGTTTTTTGTTGATCATTGTCTCTTTTATCTGTCTCTTATACACA10.8771929824561403No Hit
GGTATCAACGCAGAGTACGGGGTCTGTCTCTTATAAACATCTCCGAGCCCA10.8771929824561403No Hit
CTGCGTCCCATGCCCACGCACGCACTCGTTGCCATGACCTCCGCACCCGCG10.8771929824561403No Hit
GGTATCAACGCAGAGTACGGGGGCTGTGGAAGACACAGTCATTACTAAGTC10.8771929824561403No Hit
GCTCCAGTAGCCGAACTGCTCGCGCGACATCCAGAAGTCGATCGGCATCGG10.8771929824561403No Hit
GTTTTTTGGTTTCATCATCAAATACACTTAGTACCATTTCTTTGATTTGAT10.8771929824561403No Hit
GGACTGACGCCTGCCCGGTGCTGGAAGGTTAAGAGGACCGGTTAGTCAACG10.8771929824561403No Hit
GTTTAGCCTCATCCACGTTCGTTCGCCACTACTAGCAGAATCATTATTATT10.8771929824561403No Hit
TTTCTCTGCTGTTTGAGGATAATATGTGCCTCTGTTTGTCTGTTATGACTT10.8771929824561403No Hit
GCTCCCACTTATCCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAG10.8771929824561403No Hit
GTATCAAACAACAAGCTTTCTGTGCACTTTGAAGCAATAGAGCTGTCTCTT10.8771929824561403No Hit
GGAGAAGCGTCCTCAGCGACGGACCGGGCCTAAGTTCCCTGGAAAGGGGCG10.8771929824561403No Hit
CTCTTATCTCACGCAATTAAACACAGAAATTGGCAAAGAAAAGCAAGCTTC10.8771929824561403No Hit
GCTCTAAGCAACACTACTACCATTAGATTAAAAACTACATCAACCCAACGA10.8771929824561403No Hit
GGCTTGTGTACATGAAAATGGAATGACTATCAATGTACATAAAATGTTGTT10.8771929824561403No Hit
GAATTTACCGCCCGATTGGGGCTGCATTCCCAAACAACCCGACTCGTAGAC10.8771929824561403No Hit
ATCATTTCTTCGATTGAGCAGAAAGAAGAGAGCAAAGGGAACGAAGATCAT10.8771929824561403No Hit
CATGTGGTGATTCCGGCACCGACGAGAGCGCCGCGACCACCACCTCGGCAG10.8771929824561403No Hit
AAGCGGTGGAGTGCCGCACCCTAGATGGCGAGAGTCCAGTAGCCGAAAGCA10.8771929824561403No Hit
CGGAGATGTGTATAAGAGACAGGTATCAACGCAGAGTACGGGGTGGTATCA10.8771929824561403No Hit
CTTCTGAGGTGAAGCTTTCCAGCCACTTCGGCTTGAGGGGTTGAATCTTAA10.8771929824561403No Hit
GTATTACCTTGTGACACCAACGGTATTGATTCAGCATCTCCTGGAGTTTTT10.8771929824561403No Hit
TTTTTTGCGTTGATACCACCCCGTACTCTGCGTTGATACTGTCTCTTATAC10.8771929824561403No Hit
GAAAAGGACTTTCTTGTTTCTTTTTGGTCTTATTTAAGGTTACATAGTACC10.8771929824561403No Hit
CTCTTGTTCTTTGGATACAATTCGACTCTTCTACGGCCAAATTTCAATTTG10.8771929824561403No Hit
AACCATAACAATGTCGTTGATCCAAGTAGAAGAAACCCTCCGCGTCGATTC10.8771929824561403No Hit
AGCCTGAAGTTCGTGATGCAGCCAGGGAAGCTGCTCTGCGTGAGATCAAGG10.8771929824561403No Hit
GAACTAAGCTTAGATTCATCAGAAACACTTGAAGCACTGTCTCTTATACAC10.8771929824561403No Hit
CTTCTGATATCTCCAGGTCTTGTCACCAAAAACCTTCCCCGATTGACAGAA10.8771929824561403No Hit
CTGTTAGAGGTCTCTTCAACCTGCTCATGGCTAGATCGATCGGTTTCGGGT10.8771929824561403No Hit
CCTTTGGAAAGCGCCTACACCTAATGGCTTAAGCCGCTCTTCCCATTTCCT10.8771929824561403No Hit
AATACAGACTTATCAGGAATGGACTTGACACTAAGATTGAGAAGTCAAGGA10.8771929824561403No Hit
CTTGAAGAAGCGAATGCTTTGGAATATTCCATTCTTGTAGCAGCCACCGCT10.8771929824561403No Hit
CTTAGTAAACAGAAGATGGCGAATAGGTTTAGTAATTTCAAAGGTAAGCTG10.8771929824561403No Hit
GAGTACGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA10.8771929824561403No Hit
GTTGTGACCTGCGATAAGCCCTGGGGAGTTGGTGAACGAGCTGTGATCCGG10.8771929824561403No Hit
CTCCGAATACAGGCCGTTCTCGTTTGTACAGACAGACTTTTGGGGTGCTAA10.8771929824561403No Hit
TTATAGAGCTATTATCATGATTGGGCTGAGAACAAATTTGTAAGTCTAACT10.8771929824561403No Hit

[WARN]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.2)