H23V3BCXX l02n01 kb2_1_73.34100000009d71.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23V3BCXX l02n01 kb2_1_73.34100000009d71.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1424
Sequences flagged as poor quality	0
Sequence length	51
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACTTGCTGGAATCTCGTATGCCGTC	61	4.283707865168539	No Hit
CTTATACACATCTCCGAGCCCACGAGACAACATAATATCTCGTATGCCGTC	54	3.7921348314606744	No Hit
CTTATACACATCTCCGAGCCCACGAGACGATAACCTATCTCGTATGCCGTC	37	2.598314606741573	No Hit
CTTATACACATCTCCGAGCCCACGAGACTAGATCCTATCTCGTATGCCGTC	22	1.544943820224719	No Hit
TCTTATACACATCTCCGAGCCCACGAGACAACATAATATCTCGTATGCCGT	21	1.4747191011235954	No Hit
TCTTATACACATCTCCGAGCCCACGAGACTTGCTGGAATCTCGTATGCCGT	12	0.8426966292134831	No Hit
TCTTATACACATCTCCGAGCCCACGAGACTAGATCCTATCTCGTATGCCGT	8	0.5617977528089888	No Hit
TCTTATACACATCTCCGAGCCCACGAGACGATAACCTATCTCGTATGCCGT	8	0.5617977528089888	No Hit
CTTATACACATCTCCGAGCCCACGAGACTGCGACCTATCTCGTATGCCGTC	6	0.42134831460674155	No Hit
CTTATACACATCTCCGAGCCCACGAGACTACTTGCAATCTCGTATGCCGTC	5	0.35112359550561795	TruSeq Adapter, Index 12 (95% over 21bp)
CTCTTATACACATCTCCGAGCCCACGAGACTTGCTGGAATCTCGTATGCCG	4	0.2808988764044944	No Hit
TCTTATACACATCTCCGAGCCCACGAGACTGCGACCTATCTCGTATGCCGT	3	0.21067415730337077	No Hit
CCCATGTGCAAGTGCCGTTCACATGGAACCTTTCCCCTCTTCGGCCTTCAA	2	0.1404494382022472	No Hit
GGCTTGGAAGCAGCCATCCTTTGAAGAAAGCGTAATAGCTCACTGGTCTAG	2	0.1404494382022472	No Hit
GTATCAACGCAGAGTACGGGGTGGTATCAACGCAAAAACTGTCTCTTATAC	2	0.1404494382022472	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGCCGTC	30	9.867254E-7	44.999996	45
ATGCCGT	35	2.8606937E-6	38.571426	44
AGCCCAC	40	7.1789163E-6	33.75	17
GTATGCC	40	7.1789163E-6	33.75	42
ATCTCGT	40	7.1789163E-6	33.75	37
ATCTCCG	40	7.1789163E-6	33.75	10
TATGCCG	40	7.1789163E-6	33.75	43
GAGCCCA	40	7.1789163E-6	33.75	16
TCTCGTA	40	7.1789163E-6	33.75	38
CGTATGC	40	7.1789163E-6	33.75	41
CGAGCCC	40	7.1789163E-6	33.75	15
CCGAGCC	40	7.1789163E-6	33.75	14
TCGTATG	40	7.1789163E-6	33.75	40
TCTCCGA	40	7.1789163E-6	33.75	11
TCCGAGC	40	7.1789163E-6	33.75	13
CTCGTAT	40	7.1789163E-6	33.75	39
CTCCGAG	40	7.1789163E-6	33.75	12
GCCCACG	35	1.6340625E-4	32.142857	18
CCACGAG	35	1.6340625E-4	32.142857	20
CACGAGA	35	1.6340625E-4	32.142857	21