Basic Statistics
Measure | Value |
---|---|
Filename | H23V3BCXX l02n01 kb2_1_15.3410000000999f.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 436215 |
Sequences flagged as poor quality | 0 |
Sequence length | 51 |
%GC | 42 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
CTTATACACATCTCCGAGCCCACGAGACTAGATCCTATCTCGTATGCCGTC | 2446 | 0.5607326662311016 | No Hit |
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 1193 | 0.27348899052072945 | No Hit |
GAGTACGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 838 | 0.19210710314867668 | No Hit |
GTATCAACGCAGAGTACGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAA | 804 | 0.18431278154121247 | No Hit |
GTACGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 777 | 0.17812317320587326 | No Hit |
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 771 | 0.17674770468690898 | No Hit |
GTACGGGCAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 726 | 0.16643169079467693 | No Hit |
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 665 | 0.1524477608518735 | No Hit |
TATCAACGCAGAGTACGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAA | 564 | 0.1292940407826416 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
ATGCCGT | 370 | 0.0 | 37.093178 | 44 |
TATGCCG | 365 | 0.0 | 36.98489 | 43 |
CCCACGA | 365 | 0.0 | 36.98489 | 19 |
AGACTAG | 350 | 0.0 | 36.641457 | 25 |
TCCTATC | 355 | 0.0 | 35.4916 | 33 |
GCCCACG | 375 | 0.0 | 35.398647 | 18 |
GTATGCC | 385 | 0.0 | 35.063595 | 42 |
TCTCGTA | 385 | 0.0 | 35.063595 | 38 |
GACTAGA | 370 | 0.0 | 34.66084 | 26 |
CGAGACT | 380 | 0.0 | 34.340794 | 23 |
ATCTCGT | 395 | 0.0 | 34.17591 | 37 |
CGTATGC | 395 | 0.0 | 34.17591 | 41 |
CTCGTAT | 395 | 0.0 | 34.17591 | 39 |
GAGACTA | 380 | 0.0 | 33.74871 | 24 |
ACGAGAC | 405 | 0.0 | 33.33206 | 22 |
TATCTCG | 395 | 0.0 | 33.036713 | 36 |
CTAGATC | 400 | 0.0 | 32.623756 | 28 |
CACGAGA | 415 | 0.0 | 32.528877 | 21 |
CCTATCT | 405 | 0.0 | 32.220993 | 34 |
TCGTATG | 430 | 0.0 | 31.917387 | 40 |