H23V3BCXX l01n01 kb2_4_77.3410000000b1d3.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	H23V3BCXX l01n01 kb2_4_77.3410000000b1d3.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	313562
Sequences flagged as poor quality	0
Sequence length	51
%GC	38

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACAGGATGTGATCTCGTATGCCGTC	861	0.27458684406911554	No Hit
GTACTAAGTCAGGGGATATGATTGGAGAACATGAAATGCCAACATGTATAG	456	0.14542578501221448	No Hit
CTATAACTCTTTCCATGGGATTTTGTTTCCTATTCTAGGGAGGAATGAAGT	402	0.12820431047129435	No Hit
GACATAGATCATAAGATAACTCGACTTCATGTGTCCTTAGAAAGACCAGAC	377	0.12023140559123872	No Hit
GTATCAACGCAGAGTACGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAA	348	0.11098283593037421	No Hit
CTTTCATACTGAGTTAGCATTGTCATTGACTGTAGTCTCTATACATGTTGG	342	0.10906933875916087	No Hit
ATGAAAGACAGACTATGATTCCTAGTTCTGTTCCTAAGGAAGACATCATAG	336	0.10715584158794753	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGCCGTC	70	0.0	41.784973	45
GCCTAGT	35	6.2345243E-6	38.570744	11
ACTCTAT	30	1.1328152E-4	37.52926	1
GGTACCG	30	1.1381484E-4	37.499336	11
GTGCTAT	30	1.1381484E-4	37.499336	13
CCCCTGA	55	2.73576E-9	36.817528	37
GGGGATG	25	0.002104961	35.99936	17
GGTTAGA	25	0.002104961	35.99936	23
TGCCTAG	40	1.5571526E-5	33.7494	10
GTACCGT	45	3.483257E-5	29.99947	12
CTAGTTA	45	3.483257E-5	29.99947	13
AGCTGCC	45	3.483257E-5	29.99947	7
CATATGG	30	0.0051420643	29.999468	2
GCGATGT	30	0.0051420643	29.999468	23
GATGCCG	30	0.0051420643	29.999468	36
CACGAGA	110	0.0	28.635855	21
GTAGATT	40	6.1567046E-4	28.124502	27
GCAATCG	65	4.855119E-7	27.691814	19
CCCACGA	115	0.0	27.390818	19
CTGGTCA	115	0.0	27.390818	9